Strain Fitness in Pseudomonas simiae WCS417 around PS417_16405

Experiment: Wcs_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Wcs_0.1
3,586,784	+				+0.3
3,586,784	+				+1.0
3,586,784	+				+0.6
3,586,785	-				+0.2
3,586,796	+				+0.3
3,586,992	+		PS417_16395	0.49	-1.8
3,587,012	+		PS417_16395	0.55	-0.8
3,587,012	+		PS417_16395	0.55	-1.1
3,587,012	+		PS417_16395	0.55	-0.6
3,587,179	+				+1.6
3,587,179	+				-0.2
3,587,180	-				-0.6
3,587,195	-				+0.1
3,587,347	+		PS417_16400	0.29	-0.5
3,587,347	+		PS417_16400	0.29	+0.1
3,587,435	-		PS417_16400	0.44	-1.2
3,587,779	+				+0.0
3,587,880	-		PS417_16405	0.28	+0.3
3,587,880	-		PS417_16405	0.28	-0.4
3,587,880	-		PS417_16405	0.28	-0.4
3,587,880	-		PS417_16405	0.28	-0.3
3,587,882	+		PS417_16405	0.28	-0.6
3,587,882	+		PS417_16405	0.28	+0.3
3,587,882	+		PS417_16405	0.28	-1.4
3,588,023	+		PS417_16405	0.62	+0.3
3,588,051	-		PS417_16405	0.69	-1.3
3,588,079	-		PS417_16405	0.75	-0.7
3,588,125	+		PS417_16405	0.86	-2.1
3,588,125	+		PS417_16405	0.86	+1.1
3,588,126	-		PS417_16405	0.87	-0.3
3,588,126	-		PS417_16405	0.87	+0.2
3,588,285	-				+1.3
3,588,285	-				+0.1
3,588,286	+				+0.6
3,588,932	-				-1.3
3,588,951	+				-0.7
3,588,951	+				-2.5