Strain Fitness in Pseudomonas simiae WCS417 around PS417_16110
Experiment: Wcs_0.1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Wcs_0.1 |
|---|---|---|---|---|---|
| remove | |||||
| 3,531,314 | - | PS417_16105 | 0.37 | +0.1 | |
| 3,531,314 | - | +0.2 | |||
| 3,531,596 | + | PS417_16105 | 0.68 | -0.9 | |
| 3,531,919 | + | -0.3 | |||
| 3,531,919 | + | +0.5 | |||
| 3,531,920 | - | +0.0 | |||
| 3,532,040 | + | -1.2 | |||
| 3,532,109 | + | +0.4 | |||
| 3,532,110 | - | +0.8 | |||
| 3,532,110 | - | -0.8 | |||
| 3,532,406 | - | PS417_16110 | 0.79 | -0.2 | |
| 3,532,459 | - | +0.6 | |||
| 3,532,459 | - | +0.1 | |||
| 3,532,466 | - | -1.8 | |||
| 3,532,511 | - | +0.8 | |||
| 3,532,770 | - | +1.5 | |||
| 3,532,821 | - | -0.4 | |||
| 3,533,003 | + | PS417_16115 | 0.16 | +1.5 | |
| 3,533,312 | + | PS417_16115 | 0.28 | +3.5 | |
| 3,533,312 | + | PS417_16115 | 0.28 | +0.3 | |
| 3,533,356 | - | PS417_16115 | 0.29 | +0.0 |
Or see this region's nucleotide sequence