Strain Fitness in Pseudomonas simiae WCS417 around PS417_10180

Experiment: Wcs_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Wcs_0.1
2,177,256	+				+0.9
2,177,256	+				-0.3
2,177,257	-				+1.1
2,177,303	+				+2.6
2,177,304	-				-1.5
2,177,367	+				+1.4
2,177,367	+				-1.1
2,177,370	+				-0.3
2,177,370	+				-0.2
2,177,370	+				-0.6
2,177,370	+				+1.0
2,177,370	+				+0.1
2,177,371	-				-1.1
2,177,371	-				-1.0
2,177,371	-				-0.3
2,177,371	-				+0.2
2,177,371	-				-0.7
2,177,371	-				-0.4
2,177,371	-				+0.3
2,177,386	+				+0.2
2,177,386	+				+0.0
2,177,386	+				-0.3
2,177,386	+				-0.3
2,177,387	-				+1.9
2,177,387	-				-2.1
2,177,447	+		PS417_10175	0.25	-0.1
2,177,447	+		PS417_10175	0.25	+2.9
2,177,448	-		PS417_10175	0.25	-0.4
2,177,448	-		PS417_10175	0.25	-0.3
2,177,452	+		PS417_10175	0.27	+0.3
2,177,453	-		PS417_10175	0.27	-0.4
2,177,644	+		PS417_10175	0.88	-0.2
2,177,660	+				+0.9
2,177,670	-				-0.3
2,177,670	-				+1.0
2,177,713	+				+2.3
2,177,719	+				-2.9
2,177,723	-				-0.3
2,177,723	-				+1.3
2,177,784	-				+0.3
2,177,785	-				-0.5
2,177,804	-				-0.0
2,177,804	-				+0.3
2,177,860	+				-0.7
2,177,949	+				-2.5
2,178,033	-				+0.6
2,178,052	+				+1.6
2,178,077	+				+0.6
2,178,093	+				-0.3
2,178,093	+				-1.5
2,178,093	+				+0.8
2,178,096	+				-0.8
2,178,097	-				-1.1
2,178,176	+				-0.3
2,178,177	-				+0.2
2,178,239	+				+0.9
2,178,239	+				+0.8
2,178,240	-				+0.3
2,178,240	-				-0.5
2,178,240	-				-0.0
2,178,240	-				+1.4
2,178,241	+				+0.4
2,178,242	-				-0.4
2,178,242	-				-0.4
2,178,242	-				-0.6
2,178,242	-				-0.6
2,178,246	+				+0.5
2,178,329	-		PS417_10180	0.30	-0.3
2,178,329	-		PS417_10180	0.30	+0.2
2,178,329	-		PS417_10180	0.30	+2.4
2,178,334	+		PS417_10180	0.31	+0.1
2,178,334	+		PS417_10180	0.31	+0.8
2,178,334	+		PS417_10180	0.31	-0.1
2,178,335	-		PS417_10180	0.32	-1.1
2,178,335	-		PS417_10180	0.32	-1.3
2,178,335	-		PS417_10180	0.32	-1.5
2,178,336	+		PS417_10180	0.32	+0.4
2,178,336	+		PS417_10180	0.32	-1.9
2,178,336	+		PS417_10180	0.32	-0.5
2,178,336	+		PS417_10180	0.32	-1.9
2,178,336	+		PS417_10180	0.32	-1.7
2,178,337	-		PS417_10180	0.32	-0.0
2,178,337	-		PS417_10180	0.32	+0.2
2,178,399	-		PS417_10180	0.47	-1.2
2,178,432	+		PS417_10180	0.56	-0.5
2,178,432	+		PS417_10180	0.56	-0.7
2,178,432	+		PS417_10180	0.56	+0.6
2,178,433	-		PS417_10180	0.56	-1.9
2,178,455	+		PS417_10180	0.61	+0.0
2,178,456	-		PS417_10180	0.61	-1.0
2,178,456	-		PS417_10180	0.61	-1.3
2,178,586	+				-0.7
2,178,586	+				+0.3
2,178,587	-				+0.9
2,178,738	+		PS417_10185	0.13	+0.3
2,178,739	-		PS417_10185	0.14	-0.1
2,178,931	+		PS417_10185	0.68	+0.5
2,178,976	+		PS417_10185	0.81	+0.4
2,178,977	-		PS417_10185	0.81	-0.9
2,178,980	-		PS417_10185	0.82	+0.6
2,179,038	-				-0.8
2,179,039	+				-0.2
2,179,040	-				+0.5
2,179,125	-				+1.1
2,179,593	-		PS417_10190	0.80	+1.4