Experiment: Wcs_1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03335 and PS417_03340 are separated by 3 nucleotides PS417_03340 and PS417_03345 are separated by 242 nucleotides
PS417_03335: PS417_03335 - MFS transporter, at 764,408 to 765,697
_03335
PS417_03340: PS417_03340 - gluconate transporter, at 765,701 to 767,071
_03340
PS417_03345: PS417_03345 - type I secretion protein TolC, at 767,314 to 768,534
_03345
Position (kb) 765
766
767
768 Strain fitness (log2 ratio) -2
-1
0
1
2 at 764.744 kb on + strand, within PS417_03335 at 764.744 kb on + strand, within PS417_03335 at 764.916 kb on - strand, within PS417_03335 at 764.981 kb on + strand, within PS417_03335 at 764.982 kb on - strand, within PS417_03335 at 765.356 kb on + strand, within PS417_03335 at 765.356 kb on + strand, within PS417_03335 at 765.537 kb on - strand, within PS417_03335 at 765.537 kb on - strand, within PS417_03335 at 765.537 kb on - strand, within PS417_03335 at 765.565 kb on + strand, within PS417_03335 at 765.566 kb on - strand, within PS417_03335 at 765.655 kb on - strand at 765.655 kb on - strand at 765.757 kb on + strand at 765.757 kb on + strand at 765.758 kb on - strand at 765.758 kb on - strand at 766.017 kb on + strand, within PS417_03340 at 766.357 kb on + strand, within PS417_03340 at 766.425 kb on - strand, within PS417_03340 at 766.939 kb on + strand at 767.027 kb on - strand at 767.063 kb on + strand at 767.064 kb on - strand at 767.135 kb on + strand at 767.136 kb on - strand at 767.143 kb on - strand at 767.143 kb on - strand at 767.162 kb on + strand at 767.162 kb on + strand at 767.162 kb on + strand at 767.162 kb on + strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.258 kb on - strand at 767.288 kb on + strand at 767.695 kb on + strand, within PS417_03345 at 767.695 kb on + strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345
Per-strain Table
Position Strand Gene LocusTag Fraction Wcs_1 remove 764,744 + PS417_03335 0.26 -0.1 764,744 + PS417_03335 0.26 +0.2 764,916 - PS417_03335 0.39 -0.2 764,981 + PS417_03335 0.44 +1.0 764,982 - PS417_03335 0.44 -0.4 765,356 + PS417_03335 0.73 -1.2 765,356 + PS417_03335 0.73 -0.9 765,537 - PS417_03335 0.88 +0.2 765,537 - PS417_03335 0.88 -0.6 765,537 - PS417_03335 0.88 -0.9 765,565 + PS417_03335 0.90 +1.2 765,566 - PS417_03335 0.90 -0.6 765,655 - +0.2 765,655 - +0.3 765,757 + -0.7 765,757 + -2.6 765,758 - +0.1 765,758 - -1.1 766,017 + PS417_03340 0.23 -0.7 766,357 + PS417_03340 0.48 -1.3 766,425 - PS417_03340 0.53 -1.4 766,939 + +1.1 767,027 - -0.0 767,063 + -0.1 767,064 - +0.6 767,135 + -1.4 767,136 - -0.0 767,143 - -0.6 767,143 - -1.4 767,162 + +0.7 767,162 + +1.6 767,162 + +0.0 767,162 + +0.8 767,163 - -1.4 767,163 - +2.4 767,163 - +0.4 767,163 - -2.3 767,163 - -0.3 767,163 - +0.9 767,163 - -2.1 767,163 - -1.4 767,258 - +0.4 767,288 + -0.3 767,695 + PS417_03345 0.31 +0.8 767,695 + PS417_03345 0.31 -0.4 767,696 - PS417_03345 0.31 +0.1 767,696 - PS417_03345 0.31 -0.2 767,696 - PS417_03345 0.31 +2.2 767,696 - PS417_03345 0.31 -1.6 767,696 - PS417_03345 0.31 -0.6
Or see this region's nucleotide sequence