Strain Fitness in Pseudomonas putida KT2440 around PP_2030

Experiment: Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM
2,306,719	+		PP_2029	0.15	-0.3
2,306,828	-		PP_2029	0.26	-0.7
2,306,951	-		PP_2029	0.37	-1.0
2,306,951	-		PP_2029	0.37	-1.0
2,307,193	+				-1.5
2,307,193	+		PP_2029	0.59	+0.2
2,307,704	+		PP_2030	0.17	-1.0
2,307,705	-		PP_2030	0.17	-2.2
2,307,715	+		PP_2030	0.19	-1.6
2,307,715	+		PP_2030	0.19	-0.8
2,307,715	+		PP_2030	0.19	-0.0
2,307,715	+		PP_2030	0.19	-1.1
2,307,715	+		PP_2030	0.19	-1.5
2,307,716	-		PP_2030	0.19	-0.1
2,307,716	-				+0.1
2,307,722	-		PP_2030	0.20	-0.3
2,307,722	-		PP_2030	0.20	-0.3
2,307,887	+		PP_2030	0.54	-0.4
2,308,827	-		PP_2031	0.75	-0.4
2,308,877	-		PP_2031	0.80	-0.4
2,308,877	-		PP_2031	0.80	-0.2