Strain Fitness in Pseudomonas putida KT2440 around PP_0834
Experiment: Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM |
|---|---|---|---|---|---|
| remove | |||||
| 970,435 | + | PP_0833 | 0.25 | -0.1 | |
| 970,567 | + | PP_0833 | 0.37 | +2.9 | |
| 970,716 | + | PP_0833 | 0.51 | -2.9 | |
| 970,955 | + | PP_0833 | 0.72 | -0.3 | |
| 970,985 | + | PP_0833 | 0.75 | -2.5 | |
| 971,060 | + | PP_0833 | 0.81 | -1.3 | |
| 971,085 | + | PP_0833 | 0.84 | -0.6 | |
| 971,135 | + | PP_0833 | 0.88 | -0.2 | |
| 971,201 | + | -1.8 | |||
| 971,298 | + | -0.6 | |||
| 971,298 | + | +1.2 | |||
| 971,298 | + | -0.0 | |||
| 971,418 | + | PP_0834 | 0.32 | -1.4 | |
| 971,418 | + | PP_0834 | 0.32 | +0.3 | |
| 971,418 | + | PP_0834 | 0.32 | -1.0 | |
| 971,639 | + | -1.3 |
Or see this region's nucleotide sequence