Experiment: Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3070 and Atu3071 are separated by 103 nucleotides Atu3071 and Atu3072 are separated by 473 nucleotides
Atu3070: Atu3070 - allantoate amidohydrolase, at 72,383 to 73,624
Atu3070
Atu3071: Atu3071 - hypothetical protein, at 73,728 to 74,213
Atu3071
Atu3072: Atu3072 - peptide synthetase, at 74,687 to 78,721
Atu3072
Position (kb) 73
74
75 Strain fitness (log2 ratio) -1
0
1
2 at 72.782 kb on + strand, within Atu3070 at 72.841 kb on - strand, within Atu3070 at 72.975 kb on + strand, within Atu3070 at 72.983 kb on - strand, within Atu3070 at 73.226 kb on + strand, within Atu3070 at 73.239 kb on - strand, within Atu3070 at 73.261 kb on + strand, within Atu3070 at 73.408 kb on + strand, within Atu3070 at 73.411 kb on - strand, within Atu3070 at 73.423 kb on + strand, within Atu3070 at 73.431 kb on - strand, within Atu3070 at 73.437 kb on - strand, within Atu3070 at 73.540 kb on + strand at 73.548 kb on - strand at 73.563 kb on - strand at 73.570 kb on - strand at 73.693 kb on + strand at 73.703 kb on + strand at 73.715 kb on + strand at 73.879 kb on - strand, within Atu3071 at 73.926 kb on - strand, within Atu3071 at 73.991 kb on - strand, within Atu3071 at 73.992 kb on - strand, within Atu3071 at 73.998 kb on + strand, within Atu3071 at 74.039 kb on - strand, within Atu3071 at 74.118 kb on - strand, within Atu3071 at 74.159 kb on + strand, within Atu3071 at 74.257 kb on + strand at 74.262 kb on + strand at 74.270 kb on - strand at 74.270 kb on - strand at 74.340 kb on - strand at 74.342 kb on + strand at 74.342 kb on - strand at 74.415 kb on + strand at 74.504 kb on + strand at 74.552 kb on - strand at 74.553 kb on + strand at 74.610 kb on - strand at 74.616 kb on + strand at 74.616 kb on + strand at 74.616 kb on + strand at 74.624 kb on - strand at 74.624 kb on - strand at 74.704 kb on - strand at 74.738 kb on - strand at 74.753 kb on + strand at 74.787 kb on - strand at 74.851 kb on - strand at 75.067 kb on - strand at 75.081 kb on - strand at 75.141 kb on + strand, within Atu3072 at 75.154 kb on - strand, within Atu3072
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days remove 72,782 + Atu3070 0.32 +0.5 72,841 - Atu3070 0.37 +0.4 72,975 + Atu3070 0.48 -0.0 72,983 - Atu3070 0.48 -0.1 73,226 + Atu3070 0.68 +0.2 73,239 - Atu3070 0.69 +0.4 73,261 + Atu3070 0.71 +0.8 73,408 + Atu3070 0.83 -0.0 73,411 - Atu3070 0.83 +2.5 73,423 + Atu3070 0.84 +1.0 73,431 - Atu3070 0.84 +0.1 73,437 - Atu3070 0.85 +1.4 73,540 + -0.7 73,548 - +0.0 73,563 - -0.2 73,570 - +1.2 73,693 + +1.2 73,703 + +0.4 73,715 + +0.0 73,879 - Atu3071 0.31 +0.4 73,926 - Atu3071 0.41 +0.6 73,991 - Atu3071 0.54 -0.8 73,992 - Atu3071 0.54 +0.9 73,998 + Atu3071 0.56 +0.2 74,039 - Atu3071 0.64 +0.5 74,118 - Atu3071 0.80 +0.5 74,159 + Atu3071 0.89 -0.5 74,257 + +0.7 74,262 + +0.5 74,270 - -0.7 74,270 - +0.1 74,340 - +1.6 74,342 + +0.0 74,342 - +0.1 74,415 + +0.6 74,504 + +0.2 74,552 - -1.0 74,553 + +0.1 74,610 - -0.4 74,616 + +0.2 74,616 + +0.0 74,616 + +0.2 74,624 - +0.6 74,624 - +0.1 74,704 - +0.4 74,738 - +0.4 74,753 + +1.6 74,787 - -0.2 74,851 - -0.2 75,067 - +0.5 75,081 - -1.0 75,141 + Atu3072 0.11 +0.4 75,154 - Atu3072 0.12 +0.3
Or see this region's nucleotide sequence