Strain Fitness in Escherichia coli BW25113 around b4596
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,341,465 | - | -0.8 | |||
1,341,473 | - | +0.3 | |||
1,341,473 | - | +0.1 | |||
1,341,483 | - | +0.2 | |||
1,341,494 | - | -2.8 | |||
1,341,495 | - | -0.1 | |||
1,341,495 | - | -0.4 | |||
1,341,543 | - | -1.0 | |||
1,341,585 | - | -0.0 | |||
1,341,585 | - | -0.4 | |||
1,341,609 | - | +0.4 | |||
1,341,632 | - | +1.5 | |||
1,341,645 | - | +1.0 | |||
1,341,654 | + | +0.2 | |||
1,341,654 | + | +0.2 | |||
1,341,656 | + | -1.4 | |||
1,341,719 | + | yciT | b1284 | 0.13 | +0.9 |
1,341,719 | + | yciT | b1284 | 0.13 | +1.2 |
1,341,725 | - | yciT | b1284 | 0.14 | +1.6 |
1,341,768 | + | yciT | b1284 | 0.20 | +0.4 |
1,341,823 | - | yciT | b1284 | 0.27 | +0.9 |
1,342,104 | + | yciT | b1284 | 0.64 | +0.2 |
1,342,104 | + | yciT | b1284 | 0.64 | +1.9 |
1,342,216 | - | yciT | b1284 | 0.79 | +0.3 |
1,342,306 | - | +0.8 | |||
1,342,313 | + | -0.1 | |||
1,342,313 | + | +0.4 | |||
1,342,329 | + | +1.8 | |||
1,342,478 | + | yciZ | b4596 | 0.10 | +1.4 |
1,342,478 | + | yciZ | b4596 | 0.10 | -0.8 |
1,342,708 | - | -3.3 | |||
1,342,809 | - | -0.5 | |||
1,343,191 | - | gmr | b1285 | 0.21 | -2.4 |
1,343,224 | + | gmr | b1285 | 0.22 | +0.1 |
1,343,224 | + | gmr | b1285 | 0.22 | -1.8 |
1,343,235 | + | gmr | b1285 | 0.23 | -0.8 |
1,343,621 | + | gmr | b1285 | 0.42 | +0.5 |
1,343,621 | + | gmr | b1285 | 0.42 | +0.0 |
Or see this region's nucleotide sequence