Strain Fitness in Escherichia coli BW25113 around b4058

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
4,268,124	+				+1.4
4,268,216	+				-1.0
4,268,216	+				-0.6
4,268,274	-				-1.4
4,268,409	+	yjbQ	b4056	0.35	-0.2
4,268,417	-	yjbQ	b4056	0.37	+0.3
4,268,500	+	yjbQ	b4056	0.57	-1.3
4,268,508	-	yjbQ	b4056	0.59	+0.1
4,268,515	+	yjbQ	b4056	0.61	-0.5
4,268,556	+	yjbQ	b4056	0.71	+0.2
4,268,593	-	yjbQ	b4056	0.80	+0.6
4,268,630	+	yjbQ	b4056	0.88	+0.5
4,268,782	+	yjbR	b4057	0.28	-1.8
4,268,825	-	yjbR	b4057	0.40	-0.2
4,268,825	-	yjbR	b4057	0.40	-0.5
4,268,855	+	yjbR	b4057	0.49	-0.3
4,268,855	+	yjbR	b4057	0.49	-0.6
4,268,867	-	yjbR	b4057	0.52	-0.7
4,268,870	-	yjbR	b4057	0.53	+1.5
4,268,870	-	yjbR	b4057	0.53	-1.5
4,268,877	-	yjbR	b4057	0.55	+0.8
4,268,919	-	yjbR	b4057	0.67	+1.5
4,268,929	-	yjbR	b4057	0.69	+1.3
4,268,929	-	yjbR	b4057	0.69	+0.5
4,268,943	-	yjbR	b4057	0.73	-1.0
4,269,091	-				-0.0
4,269,115	-				-2.4
4,269,225	+				-4.3
4,269,225	-				-3.5
4,269,225	-				-1.6
4,269,244	+				-3.7
4,269,263	+				-3.7
4,269,295	-				-3.1
4,269,328	+				-2.3
4,269,338	-				-6.0
4,269,417	+	uvrA	b4058	0.12	-2.3
4,269,467	+	uvrA	b4058	0.14	-4.5
4,269,520	-	uvrA	b4058	0.16	-3.2
4,269,533	-	uvrA	b4058	0.16	-3.0
4,269,533	-	uvrA	b4058	0.16	-1.4
4,269,592	+	uvrA	b4058	0.18	-4.5
4,269,600	-	uvrA	b4058	0.19	-4.4
4,269,610	-	uvrA	b4058	0.19	-3.3
4,269,651	-	uvrA	b4058	0.21	-5.3
4,269,659	+	uvrA	b4058	0.21	-3.1
4,269,721	-	uvrA	b4058	0.23	-4.2
4,269,745	+	uvrA	b4058	0.24	-4.2
4,269,766	+	uvrA	b4058	0.25	-5.2
4,269,766	+	uvrA	b4058	0.25	-4.8
4,269,774	-	uvrA	b4058	0.25	-4.3
4,269,788	-	uvrA	b4058	0.25	-4.0
4,269,788	-	uvrA	b4058	0.25	-3.8
4,269,814	-	uvrA	b4058	0.26	-5.8
4,269,855	+	uvrA	b4058	0.28	-4.6
4,269,855	+	uvrA	b4058	0.28	-4.0
4,269,881	+	uvrA	b4058	0.29	-4.8
4,269,904	+	uvrA	b4058	0.29	-5.0
4,269,915	-	uvrA	b4058	0.30	-5.4
4,269,943	-	uvrA	b4058	0.31	-4.7
4,269,966	+	uvrA	b4058	0.32	-4.1
4,270,022	-	uvrA	b4058	0.34	-3.1
4,270,022	-	uvrA	b4058	0.34	-4.8
4,270,053	+	uvrA	b4058	0.35	-4.9
4,270,117	+	uvrA	b4058	0.37	-4.8
4,270,125	-	uvrA	b4058	0.37	-5.6
4,270,132	+	uvrA	b4058	0.38	-2.6
4,270,211	+	uvrA	b4058	0.40	-3.9
4,270,276	+	uvrA	b4058	0.43	-4.9
4,270,298	+	uvrA	b4058	0.43	-3.7
4,270,298	+	uvrA	b4058	0.43	-5.4
4,270,303	+	uvrA	b4058	0.44	-4.1
4,270,361	+	uvrA	b4058	0.46	-6.1
4,270,361	+	uvrA	b4058	0.46	-4.2
4,270,363	-	uvrA	b4058	0.46	-3.0
4,270,365	+	uvrA	b4058	0.46	-1.6
4,270,365	+	uvrA	b4058	0.46	-2.6
4,270,368	-	uvrA	b4058	0.46	-3.3
4,270,368	-	uvrA	b4058	0.46	-4.3
4,270,385	-	uvrA	b4058	0.47	-4.1
4,270,385	-	uvrA	b4058	0.47	-2.3
4,270,512	-	uvrA	b4058	0.51	-3.4
4,270,553	-	uvrA	b4058	0.52	-3.6
4,270,586	-	uvrA	b4058	0.54	-4.4
4,270,609	-	uvrA	b4058	0.54	-3.0
4,270,683	-	uvrA	b4058	0.57	-4.0
4,270,683	-	uvrA	b4058	0.57	-2.9
4,270,728	-	uvrA	b4058	0.59	-4.2
4,270,728	-	uvrA	b4058	0.59	-3.5
4,270,753	+	uvrA	b4058	0.60	-1.8
4,270,761	-	uvrA	b4058	0.60	-3.8
4,270,761	-	uvrA	b4058	0.60	-4.1
4,270,761	-	uvrA	b4058	0.60	-4.1
4,270,885	+	uvrA	b4058	0.64	-4.5
4,270,914	-	uvrA	b4058	0.65	-3.8
4,270,945	+	uvrA	b4058	0.66	-3.4
4,271,005	-	uvrA	b4058	0.68	-3.4
4,271,005	-	uvrA	b4058	0.68	-3.7
4,271,023	-	uvrA	b4058	0.69	-4.4
4,271,026	-	uvrA	b4058	0.69	-4.2
4,271,026	-	uvrA	b4058	0.69	-3.5
4,271,062	+	uvrA	b4058	0.70	-3.8
4,271,062	+	uvrA	b4058	0.70	-3.5
4,271,082	+	uvrA	b4058	0.71	-4.8
4,271,108	+	uvrA	b4058	0.72	-3.4
4,271,121	-	uvrA	b4058	0.73	-3.8
4,271,121	-	uvrA	b4058	0.73	-4.0
4,271,260	+	uvrA	b4058	0.78	-3.9
4,271,260	+	uvrA	b4058	0.78	-3.4
4,271,270	+	uvrA	b4058	0.78	-3.4
4,271,270	+	uvrA	b4058	0.78	-3.8
4,271,270	-	uvrA	b4058	0.78	-2.3
4,271,370	+	uvrA	b4058	0.81	-4.7
4,271,371	-	uvrA	b4058	0.81	-3.6
4,271,371	-	uvrA	b4058	0.81	-4.0
4,271,376	+	uvrA	b4058	0.82	-4.9
4,271,376	+	uvrA	b4058	0.82	-4.5
4,271,378	-	uvrA	b4058	0.82	-4.4
4,271,378	-	uvrA	b4058	0.82	-3.6
4,271,409	-	uvrA	b4058	0.83	-4.3
4,271,497	-	uvrA	b4058	0.86	-3.4
4,271,497	-	uvrA	b4058	0.86	-2.4
4,271,536	-	uvrA	b4058	0.87	-3.9
4,271,596	+	uvrA	b4058	0.89	-3.5
4,271,606	-	uvrA	b4058	0.90	-4.0
4,271,615	+				-4.8
4,271,696	-				-6.0
4,271,737	+				-4.5
4,271,763	-				-4.9
4,271,764	-				-4.7
4,271,855	+				-2.6
4,271,936	-				-1.5
4,272,030	-				+2.4
4,272,030	-				+1.8
4,272,064	+				-5.0
4,272,105	+				-0.7
4,272,105	+				-0.1
4,272,786	+				-0.0
4,272,786	+				-1.2
4,272,840	-	yjcB	b4060	0.20	-2.1
4,272,840	-	yjcB	b4060	0.20	+1.6
4,272,847	+	yjcB	b4060	0.23	+0.0
4,272,847	+	yjcB	b4060	0.23	-0.9
4,272,850	-	yjcB	b4060	0.24	+0.8
4,272,865	-	yjcB	b4060	0.29	+0.4
4,272,865	-	yjcB	b4060	0.29	+0.5