Strain Fitness in Escherichia coli BW25113 around b3920

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
4,108,651	+				-0.2
4,109,521	-				-1.3
4,109,552	-				-1.3
4,109,575	-				-0.3
4,109,575	-				-1.7
4,109,671	+				+0.8
4,109,675	+				+0.3
4,109,675	+				+0.1
4,109,727	+	yiiQ	b3920	0.15	-0.2
4,109,739	+	yiiQ	b3920	0.17	+0.2
4,109,752	-	yiiQ	b3920	0.19	-0.6
4,109,759	+	yiiQ	b3920	0.20	-0.2
4,109,838	+	yiiQ	b3920	0.33	+0.7
4,109,838	+	yiiQ	b3920	0.33	+1.1
4,109,838	+	yiiQ	b3920	0.33	+2.6
4,109,846	-	yiiQ	b3920	0.35	+0.5
4,109,866	-	yiiQ	b3920	0.38	+0.2
4,109,963	+	yiiQ	b3920	0.54	+1.3
4,109,963	+	yiiQ	b3920	0.54	+1.1
4,110,004	+	yiiQ	b3920	0.61	+1.7
4,110,007	-	yiiQ	b3920	0.61	+0.6
4,110,007	-	yiiQ	b3920	0.61	-0.3
4,110,106	-	yiiQ	b3920	0.78	-0.6
4,110,116	-	yiiQ	b3920	0.80	+0.1
4,110,135	-	yiiQ	b3920	0.83	+0.1
4,110,135	-	yiiQ	b3920	0.83	+1.4
4,110,159	-	yiiQ	b3920	0.87	+0.7
4,110,177	+	yiiQ	b3920	0.90	+1.8
4,110,177	+	yiiQ	b3920	0.90	+0.4
4,110,185	-				-0.2
4,110,198	-				+0.7
4,110,232	-				-0.3
4,110,233	+				+1.3
4,110,342	+				+0.2
4,110,344	+				-1.6
4,110,375	+				+0.1
4,110,402	+	yiiR	b3921	0.15	-0.0
4,110,407	+	yiiR	b3921	0.16	-0.3
4,110,407	+	yiiR	b3921	0.16	-1.2
4,110,445	+	yiiR	b3921	0.24	+0.9
4,110,449	+	yiiR	b3921	0.25	-0.6
4,110,465	+	yiiR	b3921	0.29	+0.5
4,110,502	-	yiiR	b3921	0.37	+0.1
4,110,547	-	yiiR	b3921	0.47	+0.2
4,110,549	+	yiiR	b3921	0.48	-0.0
4,110,583	-	yiiR	b3921	0.56	-0.6
4,110,623	+	yiiR	b3921	0.65	-0.1
4,110,623	+	yiiR	b3921	0.65	+0.5
4,110,665	-	yiiR	b3921	0.74	+0.7
4,110,667	+	yiiR	b3921	0.75	-0.7
4,110,669	+	yiiR	b3921	0.75	+0.5
4,110,669	+	yiiR	b3921	0.75	-0.5
4,110,674	+	yiiR	b3921	0.76	+0.3
4,110,678	+	yiiR	b3921	0.77	+0.1
4,110,678	+	yiiR	b3921	0.77	-1.0
4,110,680	+	yiiR	b3921	0.78	+1.3
4,110,680	+	yiiR	b3921	0.78	-0.4
4,110,684	+	yiiR	b3921	0.78	+0.8
4,110,684	+	yiiR	b3921	0.78	-1.3
4,110,685	+	yiiR	b3921	0.79	-3.4
4,110,697	+	yiiR	b3921	0.81	+0.4
4,110,699	+	yiiR	b3921	0.82	-0.1
4,110,699	+	yiiR	b3921	0.82	-0.5
4,110,730	+	yiiR	b3921	0.89	+0.7
4,110,743	+				+0.2
4,110,748	+				+0.3
4,110,748	+				-0.3
4,110,755	+				+0.5
4,110,789	+				-0.4
4,110,789	+				-1.6
4,110,855	-				+0.9
4,110,856	+				+1.1
4,110,858	+				-1.4
4,110,866	+				+0.1
4,110,870	+				+0.3
4,110,870	+				-2.1
4,110,870	+				+0.4
4,110,878	-				+0.2
4,110,878	-				-0.9
4,110,901	+				-0.5
4,110,911	+				-0.2
4,110,919	-				+0.6
4,110,919	-				-0.1
4,110,926	+				+1.1
4,110,934	-				-0.3
4,110,934	-				-1.5
4,110,936	-				+0.1
4,110,939	+				-0.5
4,110,964	-				+0.6
4,110,972	+				+2.0
4,110,972	+				-0.1
4,110,972	+				+0.4
4,110,973	+				+0.3
4,110,976	-				-1.0
4,110,976	-				+0.8
4,110,978	-				+0.1
4,110,980	-				+0.5
4,110,980	-				-0.7
4,110,980	-				-0.5
4,110,980	-				+0.0
4,110,981	-				+0.8
4,110,981	-				+0.5
4,110,987	+				+1.4
4,110,988	-				+0.7
4,110,988	-				-1.2
4,110,988	-				-0.2
4,110,988	-				-0.0
4,110,994	-				+0.1
4,110,998	-				-0.1
4,110,998	-				+0.4
4,110,998	-				+1.1
4,110,998	-				-0.0
4,110,998	-				-0.1
4,110,998	-				+0.8
4,110,998	-				-0.5
4,111,005	+				+0.1
4,111,005	+				-1.1
4,111,010	+				+0.8
4,111,013	-				+0.8
4,111,015	+				+2.7
4,111,017	+				+0.4
4,111,017	+				+1.6
4,111,017	+				+1.6
4,111,017	+				+0.6
4,111,017	+				+0.6
4,111,017	+				+2.0
4,111,018	-				-1.1
4,111,023	-	yiiS	b3922	0.11	+0.4
4,111,023	-	yiiS	b3922	0.11	+0.7
4,111,023	-	yiiS	b3922	0.11	-0.4
4,111,023	-	yiiS	b3922	0.11	+1.8
4,111,023	-	yiiS	b3922	0.11	-0.3
4,111,023	-	yiiS	b3922	0.11	+1.0
4,111,023	-	yiiS	b3922	0.11	-2.2
4,111,023	-	yiiS	b3922	0.11	+0.6
4,111,023	-	yiiS	b3922	0.11	+0.4
4,111,025	+	yiiS	b3922	0.12	+0.9
4,111,025	+	yiiS	b3922	0.12	-3.3
4,111,025	-	yiiS	b3922	0.12	+0.9
4,111,025	-	yiiS	b3922	0.12	-0.7
4,111,032	+	yiiS	b3922	0.14	+1.2
4,111,032	+	yiiS	b3922	0.14	-1.1
4,111,034	+	yiiS	b3922	0.15	+1.6
4,111,035	+	yiiS	b3922	0.15	+0.5
4,111,035	-	yiiS	b3922	0.15	-0.4
4,111,035	-	yiiS	b3922	0.15	+0.3
4,111,038	-	yiiS	b3922	0.16	+0.1
4,111,039	+	yiiS	b3922	0.16	+1.0
4,111,040	-	yiiS	b3922	0.17	-1.0
4,111,040	-	yiiS	b3922	0.17	-1.1
4,111,042	+	yiiS	b3922	0.17	+0.2
4,111,043	-	yiiS	b3922	0.18	-0.0
4,111,043	-	yiiS	b3922	0.18	+0.5
4,111,045	-	yiiS	b3922	0.18	+1.8
4,111,045	-	yiiS	b3922	0.18	+0.7
4,111,047	+	yiiS	b3922	0.19	-1.9
4,111,047	+	yiiS	b3922	0.19	+0.9
4,111,047	-	yiiS	b3922	0.19	-1.9
4,111,052	-	yiiS	b3922	0.21	-0.7
4,111,055	-	yiiS	b3922	0.22	-0.1
4,111,055	-	yiiS	b3922	0.22	-3.0
4,111,055	-	yiiS	b3922	0.22	+0.1
4,111,057	-	yiiS	b3922	0.22	-0.1
4,111,064	-	yiiS	b3922	0.25	+0.4
4,111,064	-	yiiS	b3922	0.25	+0.7
4,111,064	-	yiiS	b3922	0.25	-0.5
4,111,066	+	yiiS	b3922	0.25	+0.8
4,111,069	-	yiiS	b3922	0.26	+0.8
4,111,078	-	yiiS	b3922	0.29	-0.5
4,111,078	-	yiiS	b3922	0.29	+0.9
4,111,084	-	yiiS	b3922	0.31	-1.6
4,111,084	-	yiiS	b3922	0.31	-1.4
4,111,089	+	yiiS	b3922	0.33	-0.4
4,111,114	+	yiiS	b3922	0.41	-0.1
4,111,115	+	yiiS	b3922	0.42	+0.1
4,111,115	+	yiiS	b3922	0.42	-1.8
4,111,116	+	yiiS	b3922	0.42	+0.1
4,111,134	-	yiiS	b3922	0.48	+1.3
4,111,144	+	yiiS	b3922	0.51	+0.8
4,111,144	+	yiiS	b3922	0.51	-0.3
4,111,146	+	yiiS	b3922	0.52	-0.1
4,111,146	+	yiiS	b3922	0.52	-0.4
4,111,147	+	yiiS	b3922	0.52	+0.1
4,111,158	+	yiiS	b3922	0.56	+0.7
4,111,159	-	yiiS	b3922	0.56	-0.6
4,111,161	+	yiiS	b3922	0.57	+0.1
4,111,161	+	yiiS	b3922	0.57	-0.3
4,111,162	-	yiiS	b3922	0.57	-1.5
4,111,166	-	yiiS	b3922	0.59	-0.8
4,111,174	+	yiiS	b3922	0.61	+0.1
4,111,177	-	yiiS	b3922	0.62	-0.5
4,111,179	+	yiiS	b3922	0.63	+0.8
4,111,181	+	yiiS	b3922	0.64	-0.2
4,111,185	+	yiiS	b3922	0.65	+1.4
4,111,187	-	yiiS	b3922	0.66	+0.3
4,111,195	-	yiiS	b3922	0.68	-0.3
4,111,203	+	yiiS	b3922	0.71	-0.5
4,111,203	+	yiiS	b3922	0.71	+0.1
4,111,209	+	yiiS	b3922	0.73	+1.0
4,111,209	+	yiiS	b3922	0.73	+2.0
4,111,209	+	yiiS	b3922	0.73	+0.8
4,111,216	-	yiiS	b3922	0.75	-3.5
4,111,217	-	yiiS	b3922	0.76	+1.4
4,111,224	+	yiiS	b3922	0.78	+1.6
4,111,231	+	yiiS	b3922	0.80	-1.2
4,111,233	+	yiiS	b3922	0.81	-0.1
4,111,234	+	yiiS	b3922	0.81	+0.3