Strain Fitness in Escherichia coli BW25113 around b3834
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,016,671 | + | -0.3 | |||
4,016,671 | + | -0.1 | |||
4,016,687 | + | -1.7 | |||
4,016,687 | + | +0.3 | |||
4,016,691 | - | -0.9 | |||
4,016,699 | + | +0.0 | |||
4,016,702 | + | -1.0 | |||
4,016,712 | - | -0.7 | |||
4,016,797 | + | -1.7 | |||
4,016,797 | + | -0.3 | |||
4,016,841 | - | -0.3 | |||
4,016,841 | - | +0.2 | |||
4,017,662 | + | +0.6 | |||
4,017,674 | + | +0.1 | |||
4,017,674 | + | +0.5 | |||
4,017,698 | + | -1.4 | |||
4,017,698 | + | +0.5 | |||
4,017,711 | + | yigP | b3834 | 0.11 | -0.4 |
4,017,732 | + | yigP | b3834 | 0.14 | +0.5 |
4,017,752 | + | yigP | b3834 | 0.17 | +0.9 |
4,017,797 | + | yigP | b3834 | 0.25 | -0.0 |
4,017,797 | + | yigP | b3834 | 0.25 | +0.3 |
4,017,816 | + | yigP | b3834 | 0.28 | -0.1 |
4,017,816 | + | yigP | b3834 | 0.28 | +1.0 |
4,017,843 | + | yigP | b3834 | 0.32 | -0.5 |
4,017,843 | + | yigP | b3834 | 0.32 | +0.8 |
4,017,916 | + | yigP | b3834 | 0.44 | -0.4 |
4,017,992 | + | yigP | b3834 | 0.57 | -0.0 |
4,017,992 | + | yigP | b3834 | 0.57 | +1.5 |
4,018,018 | + | yigP | b3834 | 0.61 | +0.8 |
4,018,018 | + | yigP | b3834 | 0.61 | +1.0 |
4,018,038 | + | yigP | b3834 | 0.65 | +2.1 |
Or see this region's nucleotide sequence