Strain Fitness in Escherichia coli BW25113 around b2955
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,094,290 | + | yggT | b2952 | 0.79 | -0.4 |
3,094,319 | + | yggT | b2952 | 0.84 | -1.5 |
3,094,324 | + | yggT | b2952 | 0.85 | -0.9 |
3,094,333 | + | yggT | b2952 | 0.87 | -2.7 |
3,094,333 | + | yggT | b2952 | 0.87 | -2.9 |
3,094,391 | - | +0.1 | |||
3,094,400 | + | +0.5 | |||
3,094,400 | + | -0.3 | |||
3,094,451 | + | yggU | b2953 | 0.16 | -1.3 |
3,094,451 | + | yggU | b2953 | 0.16 | -1.9 |
3,094,542 | + | yggU | b2953 | 0.47 | +0.7 |
3,094,775 | + | yggV | b2954 | 0.12 | -0.1 |
3,094,879 | + | yggV | b2954 | 0.30 | -1.2 |
3,094,920 | - | yggV | b2954 | 0.37 | -1.2 |
3,094,948 | + | yggV | b2954 | 0.41 | -1.4 |
3,095,006 | + | yggV | b2954 | 0.51 | -1.5 |
3,095,095 | - | yggV | b2954 | 0.66 | -0.9 |
3,095,115 | + | yggV | b2954 | 0.69 | -0.7 |
3,095,136 | + | yggV | b2954 | 0.73 | -1.6 |
3,095,299 | - | +0.4 | |||
3,095,380 | + | +0.7 | |||
3,095,409 | - | yggW | b2955 | 0.11 | +0.1 |
3,095,442 | - | yggW | b2955 | 0.13 | +0.7 |
3,095,448 | + | yggW | b2955 | 0.14 | -0.3 |
3,095,456 | - | yggW | b2955 | 0.15 | +0.7 |
3,095,485 | + | yggW | b2955 | 0.17 | -0.0 |
3,095,609 | - | yggW | b2955 | 0.28 | +1.0 |
3,095,661 | - | yggW | b2955 | 0.33 | +1.5 |
3,095,757 | - | yggW | b2955 | 0.41 | -0.3 |
3,095,844 | - | yggW | b2955 | 0.49 | -1.4 |
3,095,886 | + | yggW | b2955 | 0.53 | +0.3 |
3,095,902 | + | yggW | b2955 | 0.54 | +1.8 |
3,096,070 | - | yggW | b2955 | 0.69 | +0.9 |
3,096,104 | - | yggW | b2955 | 0.72 | +2.1 |
3,096,146 | + | yggW | b2955 | 0.75 | +0.4 |
3,096,179 | - | yggW | b2955 | 0.78 | +0.4 |
3,096,242 | + | yggW | b2955 | 0.84 | +1.1 |
3,096,242 | + | yggW | b2955 | 0.84 | +0.8 |
3,096,281 | - | yggW | b2955 | 0.87 | +0.1 |
3,096,319 | - | +1.2 | |||
3,096,319 | - | +1.0 | |||
3,096,327 | + | +0.7 | |||
3,096,453 | + | +0.7 | |||
3,096,550 | - | -0.6 | |||
3,096,579 | - | +0.0 | |||
3,096,846 | + | yggM | b2956 | 0.26 | +0.8 |
3,096,847 | - | yggM | b2956 | 0.26 | -0.8 |
3,096,858 | + | yggM | b2956 | 0.28 | +0.4 |
3,096,866 | - | yggM | b2956 | 0.28 | +0.7 |
3,096,866 | - | yggM | b2956 | 0.28 | +0.0 |
3,096,899 | - | yggM | b2956 | 0.32 | -1.0 |
3,097,084 | - | yggM | b2956 | 0.50 | -2.6 |
3,097,107 | - | yggM | b2956 | 0.52 | -2.8 |
3,097,207 | - | yggM | b2956 | 0.62 | +0.0 |
3,097,252 | + | yggM | b2956 | 0.67 | -1.3 |
3,097,252 | + | yggM | b2956 | 0.67 | +0.1 |
3,097,420 | - | yggM | b2956 | 0.83 | -0.3 |
3,097,420 | - | yggM | b2956 | 0.83 | -0.5 |
Or see this region's nucleotide sequence