Strain Fitness in Escherichia coli BW25113 around b2614
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,747,152 | + | yfjD | b4461 | 0.28 | +0.8 |
2,747,315 | - | yfjD | b4461 | 0.40 | -1.2 |
2,747,315 | - | yfjD | b4461 | 0.40 | +0.0 |
2,747,324 | + | yfjD | b4461 | 0.41 | +0.5 |
2,747,332 | - | yfjD | b4461 | 0.42 | +1.0 |
2,747,414 | - | yfjD | b4461 | 0.48 | +0.1 |
2,747,414 | - | yfjD | b4461 | 0.48 | +0.6 |
2,747,503 | - | yfjD | b4461 | 0.55 | +0.7 |
2,747,503 | - | yfjD | b4461 | 0.55 | -0.7 |
2,747,554 | + | yfjD | b4461 | 0.59 | +0.7 |
2,747,647 | - | yfjD | b4461 | 0.66 | -2.5 |
2,747,647 | - | yfjD | b4461 | 0.66 | +2.1 |
2,747,654 | - | yfjD | b4461 | 0.67 | +1.4 |
2,747,717 | - | yfjD | b4461 | 0.72 | -2.5 |
2,747,740 | + | yfjD | b4461 | 0.73 | +0.6 |
2,747,765 | - | yfjD | b4461 | 0.75 | +1.3 |
2,747,796 | + | yfjD | b4461 | 0.78 | -0.9 |
2,747,805 | - | yfjD | b4461 | 0.78 | +0.2 |
2,747,807 | + | yfjD | b4461 | 0.79 | +0.8 |
2,747,822 | + | yfjD | b4461 | 0.80 | +1.0 |
2,747,955 | + | +0.5 | |||
2,747,984 | + | +2.8 | |||
2,748,001 | - | +0.8 | |||
2,748,011 | + | +1.1 | |||
2,748,025 | + | -0.2 | |||
2,748,069 | - | -0.1 | |||
2,748,571 | - | grpE | b2614 | 0.73 | +0.5 |
2,748,623 | - | grpE | b2614 | 0.82 | -0.5 |
2,748,804 | + | +0.0 | |||
2,748,810 | + | -1.0 | |||
2,748,818 | - | +1.8 |
Or see this region's nucleotide sequence