Strain Fitness in Escherichia coli BW25113 around b2516
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,639,871 | - | -0.8 | |||
2,639,871 | - | +1.5 | |||
2,639,924 | + | +1.5 | |||
2,639,926 | - | -0.4 | |||
2,640,019 | + | yfgA | b2516 | 0.16 | +3.1 |
2,640,019 | + | yfgA | b2516 | 0.16 | +1.9 |
2,640,027 | - | yfgA | b2516 | 0.17 | +0.2 |
2,640,027 | - | yfgA | b2516 | 0.17 | +0.8 |
2,640,027 | - | yfgA | b2516 | 0.17 | +0.1 |
2,640,037 | - | yfgA | b2516 | 0.18 | +1.0 |
2,640,037 | - | yfgA | b2516 | 0.18 | +0.7 |
2,640,071 | - | yfgA | b2516 | 0.21 | +0.2 |
2,640,129 | + | yfgA | b2516 | 0.27 | +2.1 |
2,640,129 | + | yfgA | b2516 | 0.27 | +1.8 |
2,640,146 | - | yfgA | b2516 | 0.29 | +1.2 |
2,640,158 | + | yfgA | b2516 | 0.30 | +2.1 |
2,640,262 | - | yfgA | b2516 | 0.40 | -0.5 |
2,640,262 | - | yfgA | b2516 | 0.40 | +0.6 |
2,640,310 | + | yfgA | b2516 | 0.45 | +2.6 |
2,640,315 | - | yfgA | b2516 | 0.46 | +0.5 |
2,640,336 | + | yfgA | b2516 | 0.48 | +3.3 |
2,640,336 | + | yfgA | b2516 | 0.48 | +3.0 |
2,640,347 | + | yfgA | b2516 | 0.49 | +3.2 |
2,640,347 | + | yfgA | b2516 | 0.49 | +3.0 |
2,640,347 | + | yfgA | b2516 | 0.49 | +0.5 |
2,640,348 | + | yfgA | b2516 | 0.49 | +2.2 |
2,640,384 | + | yfgA | b2516 | 0.52 | +0.9 |
2,640,387 | - | yfgA | b2516 | 0.53 | +2.2 |
2,640,442 | + | yfgA | b2516 | 0.58 | +0.5 |
2,640,442 | + | yfgA | b2516 | 0.58 | -2.3 |
2,640,953 | + | +1.8 | |||
2,640,955 | + | +0.5 | |||
2,640,963 | + | +1.5 | |||
2,640,963 | + | +1.6 | |||
2,640,963 | + | +1.8 | |||
2,640,963 | + | +3.8 | |||
2,640,963 | + | +0.3 | |||
2,640,963 | + | +0.0 | |||
2,640,971 | - | +0.2 | |||
2,640,971 | - | -0.1 | |||
2,641,026 | - | +0.9 | |||
2,641,028 | + | -3.0 | |||
2,641,038 | + | +2.5 | |||
2,641,046 | - | +0.2 | |||
2,641,046 | - | +0.7 | |||
2,641,046 | - | +0.7 | |||
2,641,173 | + | +0.4 | |||
2,641,179 | + | +0.4 | |||
2,641,181 | - | +0.4 | |||
2,641,181 | - | +0.2 | |||
2,641,187 | - | +0.7 | |||
2,641,279 | + | yfgB | b2517 | 0.11 | +1.2 |
2,641,279 | + | yfgB | b2517 | 0.11 | +0.5 |
2,641,299 | - | yfgB | b2517 | 0.13 | +1.1 |
2,641,344 | + | yfgB | b2517 | 0.17 | +1.7 |
2,641,397 | - | yfgB | b2517 | 0.21 | +0.9 |
2,641,453 | - | yfgB | b2517 | 0.26 | -1.9 |
2,641,453 | - | yfgB | b2517 | 0.26 | +1.1 |
2,641,671 | + | yfgB | b2517 | 0.45 | +0.3 |
2,641,688 | + | yfgB | b2517 | 0.46 | +1.1 |
2,641,748 | + | yfgB | b2517 | 0.52 | -1.0 |
2,641,748 | + | yfgB | b2517 | 0.52 | +1.5 |
2,641,784 | - | yfgB | b2517 | 0.55 | -0.2 |
2,641,819 | + | yfgB | b2517 | 0.58 | +1.2 |
2,641,819 | + | yfgB | b2517 | 0.58 | +0.4 |
Or see this region's nucleotide sequence