Strain Fitness in Escherichia coli BW25113 around b2446
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,559,256 | + | +0.9 | |||
2,559,410 | - | -0.7 | |||
2,559,410 | - | -1.6 | |||
2,559,536 | - | yffM | b2444 | 0.59 | -1.2 |
2,559,536 | - | yffM | b2444 | 0.59 | +1.0 |
2,559,699 | + | yffN | b2445 | 0.14 | +0.7 |
2,559,794 | - | yffN | b2445 | 0.40 | +0.4 |
2,559,794 | - | yffN | b2445 | 0.40 | -1.6 |
2,559,897 | + | yffN | b2445 | 0.68 | -1.9 |
2,559,897 | + | yffN | b2445 | 0.68 | -0.0 |
2,559,915 | - | yffN | b2445 | 0.73 | -0.5 |
2,559,941 | - | yffN | b2445 | 0.80 | +0.0 |
2,560,369 | - | yffO | b2446 | 0.57 | +1.0 |
2,560,487 | + | yffO | b2446 | 0.85 | +0.4 |
2,560,549 | + | -1.0 | |||
2,560,616 | - | yffP | b2447 | 0.12 | -0.4 |
2,560,683 | + | yffP | b2447 | 0.23 | +1.6 |
2,560,683 | + | yffP | b2447 | 0.23 | -0.2 |
2,560,876 | - | yffP | b2447 | 0.56 | -0.8 |
2,560,889 | - | yffP | b2447 | 0.58 | -0.3 |
2,561,041 | - | yffP | b2447 | 0.83 | -2.1 |
2,561,297 | - | +0.1 | |||
2,561,297 | - | -0.6 |
Or see this region's nucleotide sequence