Strain Fitness in Escherichia coli BW25113 around b1841
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,921,621 | + | yebY | b1839 | 0.68 | +0.9 |
1,921,670 | + | yebY | b1839 | 0.82 | -0.3 |
1,921,670 | + | yebY | b1839 | 0.82 | +1.3 |
1,921,682 | + | yebY | b1839 | 0.86 | -1.1 |
1,921,828 | + | +1.8 | |||
1,921,828 | + | +2.5 | |||
1,921,828 | + | +2.7 | |||
1,921,828 | + | +0.6 | |||
1,921,846 | + | yebZ | b1840 | 0.12 | -0.1 |
1,922,093 | - | yebZ | b1840 | 0.40 | +3.2 |
1,922,107 | - | yebZ | b1840 | 0.42 | +1.4 |
1,922,363 | - | yebZ | b1840 | 0.71 | +1.7 |
1,922,363 | - | yebZ | b1840 | 0.71 | +1.3 |
1,922,430 | + | yebZ | b1840 | 0.79 | +0.8 |
1,922,430 | + | yebZ | b1840 | 0.79 | +2.4 |
1,922,438 | + | yebZ | b1840 | 0.80 | +2.0 |
1,922,446 | - | yebZ | b1840 | 0.81 | +1.9 |
1,922,482 | - | yebZ | b1840 | 0.85 | +2.5 |
1,922,528 | + | +0.5 | |||
1,922,536 | - | +1.5 | |||
1,922,642 | - | +2.2 | |||
1,922,681 | + | yobA | b1841 | 0.17 | +1.6 |
1,922,681 | + | yobA | b1841 | 0.17 | +2.1 |
1,923,028 | + | +1.1 | |||
1,923,059 | - | +0.5 | |||
1,923,246 | - | holE | b1842 | 0.49 | -1.7 |
1,923,246 | - | holE | b1842 | 0.49 | +0.6 |
1,923,296 | + | holE | b1842 | 0.71 | +0.2 |
1,923,364 | + | -0.8 | |||
1,923,364 | + | +0.7 | |||
1,923,493 | + | -0.2 | |||
1,923,493 | + | +1.1 | |||
1,923,666 | - | yobB | b1843 | 0.31 | +0.5 |
1,923,831 | - | yobB | b1843 | 0.56 | -1.3 |
1,923,840 | - | yobB | b1843 | 0.57 | +0.1 |
1,923,840 | - | yobB | b1843 | 0.57 | -0.0 |
1,923,846 | + | yobB | b1843 | 0.58 | -0.4 |
Or see this region's nucleotide sequence