Strain Fitness in Escherichia coli BW25113 around b1273
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,327,500 | + | sohB | b1272 | 0.14 | -0.5 |
1,327,505 | + | sohB | b1272 | 0.14 | -0.0 |
1,327,505 | + | sohB | b1272 | 0.14 | -0.5 |
1,327,511 | - | sohB | b1272 | 0.15 | -0.0 |
1,327,511 | - | sohB | b1272 | 0.15 | -0.8 |
1,327,565 | + | sohB | b1272 | 0.20 | -0.3 |
1,327,565 | + | sohB | b1272 | 0.20 | +2.4 |
1,327,752 | - | sohB | b1272 | 0.38 | +2.7 |
1,327,752 | - | sohB | b1272 | 0.38 | +0.2 |
1,327,797 | + | sohB | b1272 | 0.42 | -1.6 |
1,327,797 | + | sohB | b1272 | 0.42 | -1.4 |
1,327,902 | - | sohB | b1272 | 0.52 | -2.1 |
1,328,003 | + | sohB | b1272 | 0.62 | -0.5 |
1,328,032 | - | sohB | b1272 | 0.64 | +1.1 |
1,328,039 | + | sohB | b1272 | 0.65 | +0.6 |
1,328,039 | + | sohB | b1272 | 0.65 | -0.8 |
1,328,144 | + | sohB | b1272 | 0.75 | -0.4 |
1,328,162 | + | sohB | b1272 | 0.77 | -1.8 |
1,328,202 | - | sohB | b1272 | 0.81 | -1.8 |
1,328,211 | + | sohB | b1272 | 0.81 | -0.1 |
1,328,211 | + | sohB | b1272 | 0.81 | -1.9 |
1,328,364 | + | -0.2 | |||
1,328,556 | + | yciN | b1273 | 0.46 | +0.8 |
1,328,569 | + | yciN | b1273 | 0.51 | +0.2 |
1,328,713 | + | -1.4 | |||
1,328,713 | + | -0.9 | |||
1,328,829 | + | -1.1 | |||
1,328,918 | - | -2.9 | |||
1,328,962 | - | -3.9 | |||
1,328,965 | + | -2.5 | |||
1,328,965 | + | -0.8 | |||
1,329,065 | + | -2.4 | |||
1,329,065 | + | -2.1 |
Or see this region's nucleotide sequence