Strain Fitness in Escherichia coli BW25113 around b1214
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,266,145 | - | +0.3 | |||
1,266,167 | + | +1.6 | |||
1,266,172 | + | +0.6 | |||
1,266,240 | - | ychQ | b1213 | 0.24 | -1.5 |
1,266,325 | + | ychQ | b1213 | 0.45 | -0.8 |
1,266,325 | + | ychQ | b1213 | 0.45 | +0.7 |
1,266,435 | - | ychQ | b1213 | 0.73 | +0.6 |
1,266,483 | + | ychQ | b1213 | 0.85 | -0.1 |
1,266,522 | - | +0.3 | |||
1,266,644 | - | ychA | b1214 | 0.12 | +0.1 |
1,266,701 | + | ychA | b1214 | 0.20 | +0.2 |
1,266,737 | + | ychA | b1214 | 0.24 | +0.9 |
1,266,990 | + | ychA | b1214 | 0.55 | +0.8 |
1,267,094 | + | ychA | b1214 | 0.68 | +1.5 |
1,267,104 | - | ychA | b1214 | 0.69 | -1.1 |
1,267,139 | + | ychA | b1214 | 0.74 | +0.0 |
1,267,242 | + | ychA | b1214 | 0.86 | +0.6 |
1,267,242 | + | ychA | b1214 | 0.86 | +0.4 |
1,267,242 | + | ychA | b1214 | 0.86 | +1.3 |
1,267,274 | + | +0.7 | |||
1,267,274 | + | -0.4 | |||
1,267,274 | - | +0.0 | |||
1,267,276 | + | +1.9 | |||
1,267,276 | + | +1.9 |
Or see this region's nucleotide sequence