Strain Fitness in Escherichia coli BW25113 around b4482

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,997,327	+	uvrD	b3813	0.61	+0.6
3,997,410	+	uvrD	b3813	0.65	+0.6
3,997,418	-	uvrD	b3813	0.65	-1.5
3,997,439	+	uvrD	b3813	0.66	-0.3
3,997,439	+	uvrD	b3813	0.66	+2.5
3,997,443	-	uvrD	b3813	0.66	-0.8
3,997,465	+	uvrD	b3813	0.67	+1.3
3,997,465	+	uvrD	b3813	0.67	+0.0
3,997,472	+	uvrD	b3813	0.68	+0.2
3,997,482	+	uvrD	b3813	0.68	-0.1
3,997,484	-	uvrD	b3813	0.68	-0.9
3,997,484	-	uvrD	b3813	0.68	-0.4
3,997,501	-	uvrD	b3813	0.69	-0.7
3,997,501	-	uvrD	b3813	0.69	-0.6
3,997,544	-	uvrD	b3813	0.71	-0.7
3,997,544	-	uvrD	b3813	0.71	-0.6
3,997,633	-	uvrD	b3813	0.75	-0.3
3,997,670	+	uvrD	b3813	0.77	+0.8
3,997,670	+	uvrD	b3813	0.77	+0.5
3,997,670	+	uvrD	b3813	0.77	-0.0
3,997,685	-	uvrD	b3813	0.78	-0.5
3,997,685	-	uvrD	b3813	0.78	-1.6
3,997,685	-	uvrD	b3813	0.78	+0.1
3,997,685	-	uvrD	b3813	0.78	-0.3
3,997,695	+	uvrD	b3813	0.78	+1.0
3,997,731	+	uvrD	b3813	0.80	+0.3
3,997,731	+	uvrD	b3813	0.80	+0.1
3,997,771	-	uvrD	b3813	0.82	-0.4
3,997,771	-	uvrD	b3813	0.82	-1.2
3,997,809	+	uvrD	b3813	0.83	+0.5
3,997,809	+	uvrD	b3813	0.83	+0.3
3,997,817	-	uvrD	b3813	0.84	-1.3
3,997,867	+	uvrD	b3813	0.86	+0.2
3,997,904	-	uvrD	b3813	0.88	-1.1
3,997,922	-	uvrD	b3813	0.89	-1.8
3,997,952	+				-0.1
3,997,959	-				-0.4
3,997,969	+				+1.0
3,997,976	+				+0.8
3,997,976	+				+0.2
3,997,977	-				-1.1
3,998,057	-				-0.7
3,998,087	+				+0.8
3,998,087	+				+0.3
3,998,163	+				+0.5
3,998,171	-				-0.5
3,998,171	-				+0.2
3,998,171	-				-0.6
3,998,257	-				-0.7
3,998,343	-				-1.1
3,998,382	+				+0.4
3,998,420	-	yigE	b4482	0.14	+0.1
3,998,529	-	yigE	b4482	0.28	-0.8
3,998,572	+	yigE	b4482	0.34	+0.4
3,998,654	-	yigE	b4482	0.44	-0.6
3,998,658	-	yigE	b4482	0.45	-1.1
3,998,717	+	yigE	b4482	0.53	+0.4
3,998,776	-	yigE	b4482	0.60	-2.1
3,998,824	+	yigE	b4482	0.67	+0.2
3,998,866	-	yigE	b4482	0.72	-3.0
3,998,912	-	yigE	b4482	0.78	-1.0
3,998,912	-	yigE	b4482	0.78	-1.0
3,998,917	+	yigE	b4482	0.79	-3.3
3,998,939	+	yigE	b4482	0.82	-0.3
3,998,941	+	yigE	b4482	0.82	-4.2
3,998,942	-	yigE	b4482	0.82	-1.1
3,998,947	-	yigE	b4482	0.83	-1.2
3,998,947	-	yigE	b4482	0.83	-1.4
3,999,078	+				-2.4
3,999,084	-				-0.5
3,999,084	-				-0.4
3,999,127	-				-3.3
3,999,127	-				-2.5
3,999,127	-				-0.9
3,999,162	+				-1.3
3,999,167	+				+0.6
3,999,209	-				+1.3
3,999,222	+				+1.4
3,999,222	+				+1.3
3,999,230	-				+3.2
3,999,230	-				+0.8
3,999,230	-				+0.7
3,999,238	+				+0.8
3,999,254	+				+1.3
3,999,257	+				+1.2
3,999,257	+				+1.3
3,999,279	+				+1.8
3,999,284	+				+1.0
3,999,284	+				+1.8
3,999,299	-				+0.8
3,999,300	-				+1.7
3,999,333	-				+1.2
3,999,333	-				+1.1
3,999,361	+				+0.5
3,999,399	-				+1.2
3,999,407	+				-2.4
3,999,407	+				-0.2
3,999,407	+				-5.1
3,999,548	-	corA	b3816	0.10	+0.1
3,999,582	+				+1.9
3,999,582	+	corA	b3816	0.14	+1.6
3,999,584	+	corA	b3816	0.14	+1.1
3,999,588	+	corA	b3816	0.15	+0.8
3,999,664	+	corA	b3816	0.23	+1.2
3,999,664	+	corA	b3816	0.23	+1.2
3,999,664	+	corA	b3816	0.23	+2.2
3,999,665	+	corA	b3816	0.23	+1.2
3,999,665	+	corA	b3816	0.23	+1.5
3,999,718	-	corA	b3816	0.28	+0.9
3,999,718	-	corA	b3816	0.28	+0.8
3,999,723	-	corA	b3816	0.29	-0.9
3,999,743	-	corA	b3816	0.31	+0.3
3,999,751	+	corA	b3816	0.32	+1.0
3,999,758	-	corA	b3816	0.32	+1.5
3,999,758	-	corA	b3816	0.32	+1.0
3,999,765	+	corA	b3816	0.33	+1.2
3,999,768	-	corA	b3816	0.34	+0.9
3,999,768	-	corA	b3816	0.34	-0.1
3,999,797	-	corA	b3816	0.37	+1.3
3,999,797	-	corA	b3816	0.37	+1.1
3,999,804	+	corA	b3816	0.37	+0.5
3,999,826	+	corA	b3816	0.40	+1.4
3,999,877	+	corA	b3816	0.45	+0.5
3,999,877	-	corA	b3816	0.45	+0.7
3,999,898	+	corA	b3816	0.47	+1.1
3,999,898	+	corA	b3816	0.47	+1.8
3,999,898	+	corA	b3816	0.47	-0.1
3,999,899	+	corA	b3816	0.47	+0.8
3,999,958	+	corA	b3816	0.54	+1.7
3,999,970	+	corA	b3816	0.55	+2.1
3,999,970	+	corA	b3816	0.55	+1.1
3,999,978	-	corA	b3816	0.56	+0.9
3,999,978	-	corA	b3816	0.56	+0.0
4,000,008	+	corA	b3816	0.59	+1.4
4,000,019	+	corA	b3816	0.60	+0.8
4,000,040	+	corA	b3816	0.62	+1.3
4,000,040	+	corA	b3816	0.62	+2.3
4,000,077	-	corA	b3816	0.66	-0.3
4,000,077	-	corA	b3816	0.66	-0.2