Strain Fitness in Escherichia coli BW25113 around b3427

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,560,860	-	glpD	b3426	0.55	+1.8
3,560,867	-	glpD	b3426	0.55	-0.2
3,560,867	-	glpD	b3426	0.55	-0.2
3,560,926	-	glpD	b3426	0.59	-0.7
3,560,926	-	glpD	b3426	0.59	-0.2
3,560,932	+	glpD	b3426	0.59	-0.7
3,560,978	+	glpD	b3426	0.63	+0.8
3,560,978	+	glpD	b3426	0.63	+0.8
3,561,021	+	glpD	b3426	0.65	-0.2
3,561,074	+	glpD	b3426	0.69	-0.2
3,561,159	+	glpD	b3426	0.75	-1.7
3,561,164	+	glpD	b3426	0.75	-1.2
3,561,231	-	glpD	b3426	0.79	-0.2
3,561,231	-	glpD	b3426	0.79	+2.4
3,561,247	+	glpD	b3426	0.80	-0.2
3,561,503	+				+0.9
3,561,503	+				+0.3
3,561,510	+				+0.3
3,561,522	+				-0.2
3,561,525	-				-0.4
3,561,672	-				+0.2
3,561,767	-				-0.3
3,561,869	+	yzgL	b3427	0.27	+0.4
3,561,923	+	yzgL	b3427	0.52	+0.6
3,561,923	+	yzgL	b3427	0.52	-0.5
3,561,968	+	yzgL	b3427	0.72	+0.5
3,561,976	-	yzgL	b3427	0.76	+0.3
3,561,976	-	yzgL	b3427	0.76	+0.3
3,561,976	-	yzgL	b3427	0.76	+0.4
3,562,075	+				-0.0
3,562,075	-				+0.7
3,562,084	+				-0.2
3,562,092	-				+0.0
3,562,128	+				-0.3
3,562,128	+				-0.2
3,562,138	+				+0.2
3,562,146	-				-0.2
3,562,194	+				-1.0
3,562,226	-				-0.2
3,562,226	-				-0.7
3,562,226	-				-0.7
3,562,244	+				-1.7
3,562,250	-				+0.1
3,562,250	-				-0.6
3,562,263	-				-0.3
3,562,271	-				-1.9
3,562,271	-				-0.3
3,562,304	-				-0.0
3,562,318	-				-2.3
3,562,330	-				-0.1
3,562,359	-				+0.7
3,562,359	-				+0.8
3,562,526	-	glgP	b3428	0.15	-0.4
3,562,578	+	glgP	b3428	0.17	+0.4
3,562,586	-	glgP	b3428	0.18	-0.6
3,562,586	-	glgP	b3428	0.18	-0.3
3,562,586	-	glgP	b3428	0.18	-0.2
3,562,588	-	glgP	b3428	0.18	+0.7
3,562,588	-	glgP	b3428	0.18	+0.8
3,562,590	+	glgP	b3428	0.18	+0.8
3,562,607	+	glgP	b3428	0.18	-0.2
3,562,612	-	glgP	b3428	0.19	-0.5
3,562,612	-	glgP	b3428	0.19	-0.6
3,562,707	-	glgP	b3428	0.22	+0.2
3,562,720	-	glgP	b3428	0.23	-2.2
3,562,720	-	glgP	b3428	0.23	-0.4
3,562,726	-	glgP	b3428	0.23	-0.4
3,562,731	-	glgP	b3428	0.23	+0.2
3,562,788	-	glgP	b3428	0.26	+0.2
3,562,826	-	glgP	b3428	0.27	-0.2
3,562,897	-	glgP	b3428	0.30	-0.3
3,562,903	+	glgP	b3428	0.30	-0.2
3,562,903	+	glgP	b3428	0.30	+0.4
3,562,916	-	glgP	b3428	0.31	-1.0
3,562,916	-	glgP	b3428	0.31	+0.3
3,562,953	-	glgP	b3428	0.33	-2.2
3,562,958	+	glgP	b3428	0.33	-0.4
3,562,988	+	glgP	b3428	0.34	-0.5
3,562,988	+	glgP	b3428	0.34	+0.3
3,563,010	+	glgP	b3428	0.35	-0.2