Strain Fitness in Escherichia coli BW25113 around b2711
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,830,983 | + | norV | b2710 | 0.34 | -0.7 |
2,830,986 | - | norV | b2710 | 0.34 | -0.4 |
2,830,986 | - | norV | b2710 | 0.34 | -0.7 |
2,831,011 | - | norV | b2710 | 0.36 | +0.4 |
2,831,011 | - | norV | b2710 | 0.36 | +0.4 |
2,831,018 | - | norV | b2710 | 0.36 | -0.5 |
2,831,018 | - | norV | b2710 | 0.36 | -0.2 |
2,831,075 | - | norV | b2710 | 0.40 | +0.5 |
2,831,075 | - | norV | b2710 | 0.40 | +0.1 |
2,831,092 | - | norV | b2710 | 0.41 | -0.1 |
2,831,109 | + | norV | b2710 | 0.42 | +0.3 |
2,831,134 | + | norV | b2710 | 0.44 | -0.0 |
2,831,273 | + | norV | b2710 | 0.54 | +0.1 |
2,831,273 | + | norV | b2710 | 0.54 | -0.1 |
2,831,314 | + | norV | b2710 | 0.57 | +0.7 |
2,831,314 | + | norV | b2710 | 0.57 | +0.8 |
2,831,629 | + | norV | b2710 | 0.79 | -0.2 |
2,831,646 | - | norV | b2710 | 0.80 | -0.8 |
2,831,646 | - | norV | b2710 | 0.80 | -0.2 |
2,831,651 | + | norV | b2710 | 0.80 | +0.1 |
2,831,706 | - | norV | b2710 | 0.84 | -0.7 |
2,831,732 | - | norV | b2710 | 0.86 | -0.2 |
2,831,748 | + | norV | b2710 | 0.87 | +0.5 |
2,831,748 | + | norV | b2710 | 0.87 | +0.0 |
2,831,829 | + | +0.1 | |||
2,831,934 | - | +0.5 | |||
2,831,957 | - | +0.9 | |||
2,832,048 | + | norW | b2711 | 0.10 | -0.0 |
2,832,064 | - | norW | b2711 | 0.11 | +0.7 |
2,832,150 | - | norW | b2711 | 0.19 | -0.1 |
2,832,281 | + | norW | b2711 | 0.31 | -0.1 |
2,832,281 | + | norW | b2711 | 0.31 | +0.2 |
2,832,364 | + | norW | b2711 | 0.38 | +2.2 |
2,832,384 | - | norW | b2711 | 0.40 | +0.6 |
2,832,384 | - | norW | b2711 | 0.40 | +1.2 |
2,832,526 | + | norW | b2711 | 0.52 | +1.2 |
2,832,896 | - | norW | b2711 | 0.85 | +0.1 |
2,832,956 | + | +0.1 | |||
2,833,005 | + | +0.3 | |||
2,833,005 | + | -0.1 | |||
2,833,046 | + | -0.1 | |||
2,833,054 | - | +0.2 | |||
2,833,119 | + | -0.2 | |||
2,833,119 | + | +1.2 | |||
2,833,350 | + | -0.2 | |||
2,833,350 | + | -0.5 | |||
2,833,353 | - | +0.3 | |||
2,833,371 | + | -0.1 | |||
2,833,399 | - | -0.3 | |||
2,833,399 | - | +0.5 | |||
2,833,408 | + | -0.3 | |||
2,833,423 | + | hypF | b2712 | 0.10 | +0.5 |
2,833,423 | + | hypF | b2712 | 0.10 | -0.3 |
2,833,581 | + | hypF | b2712 | 0.17 | +1.0 |
2,833,699 | + | hypF | b2712 | 0.22 | +0.4 |
2,833,734 | + | hypF | b2712 | 0.24 | +0.1 |
2,833,934 | - | hypF | b2712 | 0.33 | +0.2 |
2,833,962 | + | hypF | b2712 | 0.34 | +0.1 |
2,833,962 | + | hypF | b2712 | 0.34 | -0.1 |
2,833,980 | - | hypF | b2712 | 0.35 | -0.8 |
Or see this region's nucleotide sequence