Strain Fitness in Escherichia coli BW25113 around b1588

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,657,604	+	ynfE	b1587	0.62	+0.7
1,657,707	-	ynfE	b1587	0.67	-0.9
1,657,762	+	ynfE	b1587	0.69	+0.2
1,657,892	+	ynfE	b1587	0.74	+0.1
1,658,038	-	ynfE	b1587	0.80	+0.4
1,658,056	+	ynfE	b1587	0.81	-0.0
1,658,249	+	ynfE	b1587	0.89	+0.2
1,658,251	-	ynfE	b1587	0.89	+0.6
1,658,251	-	ynfE	b1587	0.89	-1.1
1,658,314	+				+0.3
1,658,488	+				+0.5
1,658,579	+				+0.1
1,658,579	+				+0.9
1,658,750	+				-0.1
1,658,750	+				+0.3
1,658,992	+	ynfF	b1588	0.17	+0.9
1,659,171	-	ynfF	b1588	0.24	+1.2
1,659,174	-	ynfF	b1588	0.25	+0.3
1,659,176	-	ynfF	b1588	0.25	-0.7
1,659,176	-	ynfF	b1588	0.25	+0.3
1,659,475	-	ynfF	b1588	0.37	+0.2
1,660,102	+	ynfF	b1588	0.63	+0.1
1,660,208	+	ynfF	b1588	0.67	-1.1
1,660,366	-	ynfF	b1588	0.74	+2.4
1,660,378	+	ynfF	b1588	0.74	-1.2
1,660,766	+				+0.5
1,660,766	+				+1.0
1,660,779	-				+0.5
1,660,779	-				+0.7
1,660,790	-				+0.1
1,661,057	-				+1.0
1,661,346	-	ynfG	b1589	0.54	+0.0
1,661,351	+	ynfG	b1589	0.55	-0.4
1,661,351	+	ynfG	b1589	0.55	+0.3
1,661,364	-	ynfG	b1589	0.57	-0.1
1,661,755	+	ynfH	b1590	0.14	+0.1
1,661,755	+	ynfH	b1590	0.14	+0.7
1,661,782	-	ynfH	b1590	0.17	-0.7
1,661,851	-	ynfH	b1590	0.25	+0.2