Strain Fitness in Escherichia coli BW25113 around b1456
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,525,932 | + | +1.5 | |||
1,525,932 | + | +3.0 | |||
1,525,953 | + | -0.4 | |||
1,525,953 | + | -0.2 | |||
1,525,953 | + | -0.4 | |||
1,526,080 | + | -0.4 | |||
1,527,372 | + | rhsE | b1456 | 0.71 | +1.2 |
1,527,416 | + | rhsE | b1456 | 0.73 | +0.4 |
1,527,419 | + | rhsE | b1456 | 0.73 | +0.2 |
1,527,435 | - | rhsE | b1456 | 0.74 | +0.8 |
1,527,462 | + | rhsE | b1456 | 0.75 | +0.3 |
1,527,506 | + | rhsE | b1456 | 0.78 | +0.4 |
1,527,508 | + | rhsE | b1456 | 0.78 | +1.0 |
1,527,508 | + | rhsE | b1456 | 0.78 | +0.3 |
1,527,550 | + | rhsE | b1456 | 0.80 | +1.0 |
1,527,550 | + | rhsE | b1456 | 0.80 | +0.6 |
1,527,565 | + | rhsE | b1456 | 0.80 | +2.1 |
1,527,573 | - | rhsE | b1456 | 0.81 | -1.4 |
1,527,601 | + | rhsE | b1456 | 0.82 | +0.1 |
1,527,601 | + | rhsE | b1456 | 0.82 | -0.9 |
1,527,616 | + | rhsE | b1456 | 0.83 | -1.4 |
1,527,656 | - | rhsE | b1456 | 0.85 | +0.1 |
1,527,659 | + | rhsE | b1456 | 0.85 | +0.8 |
1,527,677 | + | rhsE | b1456 | 0.86 | +0.1 |
1,527,686 | + | rhsE | b1456 | 0.86 | +1.1 |
1,527,686 | + | rhsE | b1456 | 0.86 | +1.1 |
1,527,763 | + | -0.5 | |||
1,527,815 | + | -0.6 | |||
1,527,877 | + | +0.1 | |||
1,527,877 | + | +1.1 | |||
1,527,901 | + | +0.1 | |||
1,527,901 | + | -1.0 | |||
1,527,901 | + | +0.1 | |||
1,528,487 | - | +0.1 | |||
1,528,494 | - | +0.1 | |||
1,528,504 | - | -0.9 | |||
1,528,504 | - | +0.1 | |||
1,528,606 | + | +0.1 | |||
1,528,606 | + | +0.1 |
Or see this region's nucleotide sequence