Strain Fitness in Escherichia coli BW25113 around b1372
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,426,405 | + | insH-5 | b1370 | 0.65 | +0.0 |
1,426,456 | - | insH-5 | b1370 | 0.70 | -0.1 |
1,426,658 | + | -0.0 | |||
1,426,658 | + | -0.4 | |||
1,426,738 | + | +0.2 | |||
1,426,738 | + | +2.5 | |||
1,426,746 | + | +0.3 | |||
1,426,877 | + | -0.3 | |||
1,426,954 | - | -0.3 | |||
1,426,954 | - | +2.1 | |||
1,427,144 | - | +0.1 | |||
1,427,251 | - | -0.1 | |||
1,427,764 | - | b1372 | b1372 | 0.21 | +0.5 |
1,427,764 | - | b1372 | b1372 | 0.21 | -1.3 |
1,427,937 | + | b1372 | b1372 | 0.26 | +0.5 |
1,428,125 | + | b1372 | b1372 | 0.31 | +0.4 |
1,428,482 | + | b1372 | b1372 | 0.42 | +0.5 |
1,428,485 | - | b1372 | b1372 | 0.42 | +0.4 |
1,428,485 | - | b1372 | b1372 | 0.42 | +0.2 |
1,428,506 | + | b1372 | b1372 | 0.43 | +0.5 |
1,428,633 | - | b1372 | b1372 | 0.46 | +0.3 |
1,428,633 | - | b1372 | b1372 | 0.46 | -0.1 |
1,428,681 | - | b1372 | b1372 | 0.48 | -1.4 |
1,428,681 | - | b1372 | b1372 | 0.48 | -0.2 |
1,428,751 | + | b1372 | b1372 | 0.50 | +0.4 |
1,428,807 | - | b1372 | b1372 | 0.52 | +0.8 |
1,428,972 | + | b1372 | b1372 | 0.56 | -0.2 |
1,429,180 | - | b1372 | b1372 | 0.63 | +0.2 |
1,429,180 | - | b1372 | b1372 | 0.63 | +0.2 |
1,429,248 | + | b1372 | b1372 | 0.65 | -1.1 |
1,429,418 | + | b1372 | b1372 | 0.70 | +1.2 |
1,429,429 | + | b1372 | b1372 | 0.70 | +0.6 |
1,429,429 | + | b1372 | b1372 | 0.70 | +1.5 |
1,429,526 | - | b1372 | b1372 | 0.73 | +0.2 |
1,429,542 | - | b1372 | b1372 | 0.73 | -1.8 |
1,429,679 | + | b1372 | b1372 | 0.77 | +0.6 |
1,429,832 | - | b1372 | b1372 | 0.82 | +1.1 |
1,430,281 | + | +0.2 | |||
1,431,253 | - | pinR | b1374 | 0.25 | -0.2 |
Or see this region's nucleotide sequence