Strain Fitness in Escherichia coli BW25113 around b0142

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
156,298	-				-0.1
156,298	-				+0.1
156,298	-				+1.2
156,298	-				-0.2
156,298	-				-0.4
156,298	-				-0.9
156,298	-				-0.7
156,312	-				-0.1
156,322	-				+0.6
156,322	-				+0.6
156,322	-				+0.2
156,324	-				+1.4
156,324	-				-2.2
156,324	-				-0.6
156,324	-				-0.5
156,324	-				+0.8
156,324	-				-0.1
156,324	-				+1.4
156,324	-				+1.2
156,324	-				+1.1
156,324	-				-0.9
156,332	-				-0.1
156,332	-				-0.4
156,356	-				+1.2
156,356	-				+0.2
156,356	-				-1.7
156,356	-				+1.6
156,359	-	yadN	b0141	0.10	-0.4
156,361	-	yadN	b0141	0.11	+1.5
156,367	-	yadN	b0141	0.12	-0.6
156,376	-	yadN	b0141	0.13	+0.6
156,376	-	yadN	b0141	0.13	-1.9
156,427	-	yadN	b0141	0.22	+0.3
156,428	-	yadN	b0141	0.22	-0.4
156,428	-	yadN	b0141	0.22	-2.4
156,429	+	yadN	b0141	0.22	-0.4
156,429	+	yadN	b0141	0.22	+0.6
156,431	+	yadN	b0141	0.23	+0.6
156,431	+	yadN	b0141	0.23	+0.6
156,432	+	yadN	b0141	0.23	+0.6
156,432	+	yadN	b0141	0.23	-0.4
156,437	-	yadN	b0141	0.24	-0.4
156,437	-	yadN	b0141	0.24	-0.4
156,437	-	yadN	b0141	0.24	+0.3
156,437	-	yadN	b0141	0.24	+0.1
156,437	-	yadN	b0141	0.24	-0.9
156,437	-	yadN	b0141	0.24	-0.9
156,437	-	yadN	b0141	0.24	+1.1
156,439	-	yadN	b0141	0.24	-0.2
156,439	-	yadN	b0141	0.24	+0.6
156,439	-	yadN	b0141	0.24	+0.2
156,439	-	yadN	b0141	0.24	+2.0
156,439	-	yadN	b0141	0.24	+0.4
156,440	-	yadN	b0141	0.24	+0.6
156,486	+	yadN	b0141	0.32	-0.4
156,489	-	yadN	b0141	0.32	-0.4
156,489	-	yadN	b0141	0.32	+0.6
156,521	-	yadN	b0141	0.38	-0.4
156,533	-	yadN	b0141	0.40	+0.8
156,545	-	yadN	b0141	0.42	+0.6
156,547	-	yadN	b0141	0.42	+1.0
156,560	-	yadN	b0141	0.45	+1.6
156,600	+	yadN	b0141	0.51	+0.6
156,602	+	yadN	b0141	0.52	+0.6
156,605	-	yadN	b0141	0.52	+0.0
156,642	+	yadN	b0141	0.59	+0.6
156,661	+	yadN	b0141	0.62	+0.6
156,682	-	yadN	b0141	0.65	+0.1
156,682	-	yadN	b0141	0.65	-0.7
156,685	-	yadN	b0141	0.66	+2.2
156,685	-	yadN	b0141	0.66	+0.1
156,685	-	yadN	b0141	0.66	+0.1
156,687	-	yadN	b0141	0.66	-0.9
156,705	+	yadN	b0141	0.69	+0.9
156,711	+	yadN	b0141	0.70	+0.6
156,721	+	yadN	b0141	0.72	+0.6
156,721	+	yadN	b0141	0.72	-0.9
156,721	+	yadN	b0141	0.72	-1.9
156,722	+	yadN	b0141	0.72	-0.4
156,734	+	yadN	b0141	0.74	+3.0
156,735	+	yadN	b0141	0.75	+0.6
156,735	+	yadN	b0141	0.75	+1.2
156,744	+	yadN	b0141	0.76	-0.9
156,755	+	yadN	b0141	0.78	-0.8
156,757	+	yadN	b0141	0.78	-1.4
156,759	+	yadN	b0141	0.79	-2.9
156,786	+	yadN	b0141	0.83	+0.6
156,789	+	yadN	b0141	0.84	+3.2
156,793	+	yadN	b0141	0.84	+0.4
156,804	+	yadN	b0141	0.86	+0.2
156,823	+	yadN	b0141	0.90	+0.6
156,823	+	yadN	b0141	0.90	+0.6
156,825	+				+0.2
156,827	+				+0.4
156,827	+				-0.7
156,833	-				+0.6
156,834	+				+1.6
156,849	+				-0.7
156,849	+				+0.2
156,849	+				+2.4
156,850	+				+2.2
156,854	+				-1.4
156,854	+				-0.8
157,218	-				+1.6
157,279	-				-1.9
157,291	-				-2.2
157,301	-	folK	b0142	0.10	+1.1
157,745	+				-0.2
157,870	-	pcnB	b0143	0.10	+0.4
157,906	-	pcnB	b0143	0.13	-0.6
157,906	-	pcnB	b0143	0.13	-0.9
157,923	-	pcnB	b0143	0.14	-0.9
158,143	+	pcnB	b0143	0.30	+0.1
158,156	+	pcnB	b0143	0.31	-0.9
158,227	-	pcnB	b0143	0.36	+0.6
158,249	-	pcnB	b0143	0.37	-0.7
158,249	-	pcnB	b0143	0.37	-2.2
158,312	-	pcnB	b0143	0.42	-0.4
158,342	-	pcnB	b0143	0.44	-0.9
158,378	-	pcnB	b0143	0.46	-0.2
158,400	+	pcnB	b0143	0.48	-1.5
158,408	-	pcnB	b0143	0.49	-2.3
158,408	-	pcnB	b0143	0.49	-0.9
158,426	-	pcnB	b0143	0.50	+0.2
158,442	-	pcnB	b0143	0.51	-0.9
158,442	-	pcnB	b0143	0.51	-0.7
158,447	-	pcnB	b0143	0.51	-0.4
158,516	+	pcnB	b0143	0.56	-1.9
158,522	-	pcnB	b0143	0.57	-1.7