Strain Fitness in Escherichia coli BW25113 around b4536
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,906,101 | - | -0.2 | |||
1,906,214 | - | -0.8 | |||
1,906,230 | - | -0.0 | |||
1,906,245 | - | +0.8 | |||
1,906,248 | - | -0.4 | |||
1,906,250 | - | +0.8 | |||
1,906,256 | - | +0.4 | |||
1,906,256 | - | +0.2 | |||
1,906,300 | - | +0.3 | |||
1,906,300 | - | -1.2 | |||
1,906,588 | - | -1.2 | |||
1,907,006 | - | yobH | b4536 | 0.24 | +0.8 |
1,907,020 | - | yobH | b4536 | 0.30 | -0.2 |
1,907,067 | + | yobH | b4536 | 0.49 | +0.1 |
1,907,067 | + | yobH | b4536 | 0.49 | +1.5 |
1,907,101 | + | yobH | b4536 | 0.63 | +0.8 |
1,907,150 | + | yobH | b4536 | 0.84 | -0.1 |
1,907,150 | + | yobH | b4536 | 0.84 | +1.2 |
1,907,213 | - | +0.8 | |||
1,907,226 | - | +0.8 | |||
1,907,333 | - | -1.4 | |||
1,907,333 | - | -0.4 | |||
1,907,352 | - | -0.2 | |||
1,907,389 | - | -0.2 | |||
1,907,462 | - | -1.5 | |||
1,907,560 | + | kdgR | b1827 | 0.29 | +1.8 |
1,907,609 | - | kdgR | b1827 | 0.35 | +0.3 |
1,907,609 | - | kdgR | b1827 | 0.35 | +0.4 |
1,907,698 | - | kdgR | b1827 | 0.46 | +0.5 |
1,908,131 | - | -0.2 | |||
1,908,133 | - | +0.7 | |||
1,908,151 | - | +0.4 |
Or see this region's nucleotide sequence