Strain Fitness in Escherichia coli BW25113 around b1231
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,286,125 | + | +1.5 | |||
1,286,316 | - | +0.8 | |||
1,286,316 | - | +1.8 | |||
1,286,690 | - | -0.8 | |||
1,286,690 | - | +0.4 | |||
1,286,805 | + | tyrT | b1231 | 0.52 | +0.9 |
1,286,916 | + | -0.7 | |||
1,287,056 | + | +0.1 | |||
1,287,064 | + | +0.1 | |||
1,287,233 | + | purU | b1232 | 0.27 | -1.5 |
1,287,255 | - | purU | b1232 | 0.30 | +1.1 |
1,287,255 | - | purU | b1232 | 0.30 | +0.8 |
1,287,342 | + | purU | b1232 | 0.40 | -0.3 |
1,287,375 | + | purU | b1232 | 0.44 | +0.8 |
1,287,423 | - | purU | b1232 | 0.50 | -0.6 |
1,287,425 | + | purU | b1232 | 0.50 | -1.8 |
1,287,439 | + | purU | b1232 | 0.51 | -1.0 |
1,287,448 | + | purU | b1232 | 0.53 | -2.2 |
1,287,473 | - | purU | b1232 | 0.56 | -0.4 |
1,287,491 | + | purU | b1232 | 0.58 | -0.4 |
1,287,647 | - | purU | b1232 | 0.76 | +0.6 |
1,287,691 | - | purU | b1232 | 0.81 | -0.2 |
1,287,714 | + | purU | b1232 | 0.84 | -2.9 |
1,287,801 | - | -1.5 | |||
1,287,801 | - | -0.0 | |||
1,287,837 | + | -0.5 |
Or see this region's nucleotide sequence