Strain Fitness in Escherichia coli BW25113 around b2586
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,721,348 | + | pssA | b2585 | 0.44 | +1.0 |
2,722,110 | + | +0.1 | |||
2,722,113 | - | +0.0 | |||
2,722,115 | + | -1.0 | |||
2,722,171 | + | +0.1 | |||
2,722,227 | + | yfiM | b2586 | 0.24 | +0.2 |
2,722,332 | + | yfiM | b2586 | 0.56 | +1.2 |
2,722,387 | - | yfiM | b2586 | 0.73 | -1.1 |
2,722,415 | + | yfiM | b2586 | 0.82 | +1.2 |
2,722,435 | + | yfiM | b2586 | 0.88 | +0.4 |
2,722,539 | - | -0.0 | |||
2,722,539 | - | +0.4 | |||
2,722,557 | + | -2.0 | |||
2,722,557 | + | +0.3 | |||
2,722,570 | + | +2.8 | |||
2,722,604 | - | kgtP | b2587 | 0.10 | -0.9 |
2,722,604 | - | kgtP | b2587 | 0.10 | -0.8 |
2,722,633 | + | kgtP | b2587 | 0.13 | +1.4 |
2,722,641 | - | kgtP | b2587 | 0.13 | +0.1 |
2,722,783 | + | kgtP | b2587 | 0.24 | +1.2 |
2,722,801 | + | kgtP | b2587 | 0.25 | +0.5 |
2,722,943 | + | kgtP | b2587 | 0.36 | +3.1 |
2,722,943 | + | kgtP | b2587 | 0.36 | -1.1 |
2,723,060 | - | kgtP | b2587 | 0.45 | -0.3 |
2,723,060 | - | kgtP | b2587 | 0.45 | +0.6 |
2,723,145 | + | kgtP | b2587 | 0.52 | +2.6 |
2,723,210 | - | kgtP | b2587 | 0.57 | -2.3 |
2,723,235 | + | kgtP | b2587 | 0.59 | -0.8 |
2,723,348 | - | kgtP | b2587 | 0.68 | +0.5 |
2,723,408 | - | kgtP | b2587 | 0.72 | +0.3 |
2,723,418 | + | kgtP | b2587 | 0.73 | -0.1 |
2,723,418 | + | kgtP | b2587 | 0.73 | -1.0 |
2,723,436 | + | kgtP | b2587 | 0.74 | +0.7 |
2,723,457 | - | kgtP | b2587 | 0.76 | +1.2 |
Or see this region's nucleotide sequence