Strain Fitness in Escherichia coli BW25113 around b1920
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,996,778 | - | yedO | b1919 | 0.26 | -2.0 |
1,997,064 | - | yedO | b1919 | 0.55 | -0.5 |
1,997,231 | - | yedO | b1919 | 0.72 | +1.6 |
1,997,231 | - | yedO | b1919 | 0.72 | +2.4 |
1,997,256 | - | yedO | b1919 | 0.75 | -0.8 |
1,997,658 | + | -2.4 | |||
1,997,811 | + | fliY | b1920 | 0.25 | +1.7 |
1,997,811 | + | fliY | b1920 | 0.25 | -0.2 |
1,997,931 | - | fliY | b1920 | 0.40 | +0.3 |
1,998,266 | + | fliY | b1920 | 0.82 | +1.5 |
1,998,375 | + | -1.8 | |||
1,998,375 | + | +0.2 | |||
1,998,387 | - | +0.3 | |||
1,998,549 | - | -1.5 | |||
1,998,568 | + | fliZ | b1921 | 0.13 | -1.4 |
1,998,568 | - | fliZ | b1921 | 0.13 | -1.5 |
1,998,616 | - | fliZ | b1921 | 0.22 | +0.8 |
1,998,981 | + | fliZ | b1921 | 0.88 | +1.1 |
1,998,981 | + | fliZ | b1921 | 0.88 | +0.0 |
1,999,139 | + | +1.5 | |||
1,999,145 | - | +0.4 | |||
1,999,145 | - | +1.9 | |||
1,999,177 | - | fliA | b1922 | 0.12 | -0.5 |
1,999,209 | - | fliA | b1922 | 0.16 | -0.7 |
1,999,292 | - | fliA | b1922 | 0.28 | -1.2 |
1,999,292 | - | fliA | b1922 | 0.28 | +0.8 |
1,999,302 | - | fliA | b1922 | 0.29 | -0.6 |
Or see this region's nucleotide sequence