Strain Fitness in Escherichia coli BW25113 around b1540
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,625,380 | + | -0.7 | |||
1,625,442 | - | +1.1 | |||
1,625,443 | - | +1.2 | |||
1,625,443 | - | +1.4 | |||
1,625,681 | + | ydfG | b1539 | 0.19 | -0.0 |
1,625,871 | + | ydfG | b1539 | 0.44 | +0.3 |
1,625,871 | + | ydfG | b1539 | 0.44 | +0.4 |
1,626,043 | - | ydfG | b1539 | 0.67 | -0.3 |
1,626,461 | + | ydfH | b1540 | 0.12 | +1.6 |
1,626,955 | + | ydfH | b1540 | 0.84 | +1.1 |
1,627,253 | - | -1.5 | |||
1,627,424 | - | -0.0 | |||
1,627,446 | + | +0.3 | |||
1,627,454 | - | +0.8 | |||
1,627,556 | - | -0.2 | |||
1,627,675 | - | ydfI | b1542 | 0.14 | +0.5 |
1,627,873 | + | ydfI | b1542 | 0.27 | -1.8 |
Or see this region's nucleotide sequence