Strain Fitness in Escherichia coli BW25113 around b1527
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,612,999 | + | yneJ | b1526 | 0.19 | +0.5 |
1,612,999 | + | yneJ | b1526 | 0.19 | +0.7 |
1,613,337 | - | yneJ | b1526 | 0.58 | -0.6 |
1,613,373 | + | yneJ | b1526 | 0.62 | +0.0 |
1,613,444 | + | yneJ | b1526 | 0.70 | -0.0 |
1,613,563 | + | yneJ | b1526 | 0.83 | -0.2 |
1,613,695 | - | +0.7 | |||
1,613,695 | - | +0.7 | |||
1,613,743 | + | -0.3 | |||
1,613,743 | + | -0.9 | |||
1,613,750 | + | +0.7 | |||
1,613,769 | + | -1.3 | |||
1,613,774 | + | -0.3 | |||
1,613,813 | + | +1.3 | |||
1,614,197 | - | yneK | b1527 | 0.37 | +0.7 |
1,614,356 | - | yneK | b1527 | 0.51 | +0.7 |
1,614,567 | - | yneK | b1527 | 0.70 | +0.7 |
1,614,730 | - | yneK | b1527 | 0.84 | +1.7 |
1,614,730 | - | yneK | b1527 | 0.84 | +1.8 |
1,614,774 | - | yneK | b1527 | 0.88 | +0.8 |
1,614,810 | + | -0.0 | |||
1,615,094 | - | +0.7 | |||
1,615,094 | - | +0.7 | |||
1,615,131 | - | +0.4 | |||
1,615,131 | - | +0.1 | |||
1,615,269 | + | ydeA | b1528 | 0.18 | +0.3 |
1,615,269 | + | ydeA | b1528 | 0.18 | +0.7 |
1,615,438 | + | ydeA | b1528 | 0.32 | -0.6 |
1,615,468 | + | ydeA | b1528 | 0.35 | +0.0 |
1,615,468 | + | ydeA | b1528 | 0.35 | +0.1 |
1,615,572 | + | ydeA | b1528 | 0.44 | -0.3 |
1,615,634 | - | ydeA | b1528 | 0.49 | -1.2 |
1,615,634 | - | ydeA | b1528 | 0.49 | +2.3 |
1,615,704 | - | ydeA | b1528 | 0.55 | +0.2 |
1,615,741 | - | ydeA | b1528 | 0.58 | -1.0 |
1,615,741 | - | ydeA | b1528 | 0.58 | -0.2 |
Or see this region's nucleotide sequence