Strain Fitness in Escherichia coli BW25113 around b1357
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,417,427 | + | b1355 | b1355 | 0.60 | +0.8 |
1,417,431 | - | b1355 | b1355 | 0.63 | -2.6 |
1,417,459 | + | b1355 | b1355 | 0.84 | +0.6 |
1,417,518 | - | -0.6 | |||
1,417,574 | + | -1.1 | |||
1,418,573 | - | ydaS | b1357 | 0.62 | +0.6 |
1,418,619 | - | ydaS | b1357 | 0.77 | +0.9 |
1,418,746 | - | +0.1 | |||
1,418,848 | - | ydaT | b1358 | 0.33 | +2.7 |
1,418,848 | - | ydaT | b1358 | 0.33 | -0.6 |
1,419,186 | + | -1.0 | |||
1,419,186 | + | -1.9 | |||
1,419,235 | - | ydaU | b1359 | 0.11 | -1.6 |
1,419,360 | - | ydaU | b1359 | 0.25 | -0.5 |
1,419,393 | - | ydaU | b1359 | 0.29 | -1.1 |
1,419,393 | - | ydaU | b1359 | 0.29 | -1.2 |
Or see this region's nucleotide sequence