Strain Fitness in Escherichia coli BW25113 around b1242
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,296,997 | - | adhE | b1241 | 0.87 | +0.6 |
1,297,301 | + | +0.8 | |||
1,297,311 | - | +1.6 | |||
1,297,349 | - | +0.7 | |||
1,297,349 | - | +0.4 | |||
1,297,391 | + | -2.0 | |||
1,297,500 | + | -0.2 | |||
1,297,500 | + | +0.0 | |||
1,297,531 | - | -0.3 | |||
1,297,531 | - | -1.0 | |||
1,297,558 | - | -0.3 | |||
1,297,750 | - | +3.2 | |||
1,297,787 | - | +0.4 | |||
1,297,936 | - | ychE | b1242 | 0.18 | +0.0 |
1,298,207 | - | ychE | b1242 | 0.60 | +1.0 |
1,298,242 | - | ychE | b1242 | 0.65 | +0.7 |
1,298,242 | - | ychE | b1242 | 0.65 | +0.4 |
1,298,286 | - | ychE | b1242 | 0.72 | +0.2 |
1,298,300 | + | ychE | b1242 | 0.74 | -1.0 |
1,298,334 | - | ychE | b1242 | 0.79 | +1.5 |
1,298,383 | + | ychE | b1242 | 0.87 | +0.5 |
1,298,706 | - | +0.3 | |||
1,298,706 | - | +0.6 | |||
1,298,778 | + | +0.4 | |||
1,298,778 | + | +0.9 | |||
1,298,844 | + | +0.2 | |||
1,298,852 | + | +0.2 | |||
1,298,937 | - | +1.8 | |||
1,299,060 | + | +0.3 | |||
1,299,129 | + | +0.4 | |||
1,299,130 | - | +1.0 | |||
1,299,130 | - | +1.4 | |||
1,299,134 | + | -1.8 | |||
1,299,139 | - | +0.9 | |||
1,299,142 | - | -0.2 | |||
1,299,172 | + | +0.7 | |||
1,299,290 | + | -0.0 |
Or see this region's nucleotide sequence