Strain Fitness in Escherichia coli BW25113 around b1109

Experiment: Cisplatin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.1 mg/ml
1,164,356	-				+0.3
1,164,707	-	ycfP	b1108	0.63	+0.1
1,164,715	-	ycfP	b1108	0.64	-0.0
1,164,715	-	ycfP	b1108	0.64	-0.7
1,164,925	+				-0.1
1,164,925	+				+0.9
1,164,943	+				-0.9
1,165,028	-				-0.3
1,165,028	-				+0.2
1,165,364	-				+3.1
1,165,364	-				+0.3
1,165,374	-				+2.3
1,165,602	-	ndh	b1109	0.23	+0.9
1,165,602	-	ndh	b1109	0.23	+1.1
1,165,673	+	ndh	b1109	0.28	+2.0
1,165,904	+	ndh	b1109	0.46	+0.9
1,165,904	+	ndh	b1109	0.46	-1.7
1,166,067	-	ndh	b1109	0.58	+0.9
1,166,072	-	ndh	b1109	0.59	+0.4
1,166,095	+	ndh	b1109	0.60	+1.3
1,166,219	-	ndh	b1109	0.70	+1.0
1,166,244	+	ndh	b1109	0.72	+2.3
1,166,244	+	ndh	b1109	0.72	+1.3
1,166,257	+	ndh	b1109	0.73	+1.0
1,166,257	+	ndh	b1109	0.73	+0.9
1,166,333	+	ndh	b1109	0.79	-0.6
1,166,478	-	ndh	b1109	0.90	+1.9
1,166,501	-				+1.5
1,166,526	+				+1.0
1,166,573	-				-1.0
1,166,623	-				+0.3
1,166,655	+				-1.3
1,166,661	-				+0.9
1,166,824	+				+1.4
1,166,972	+	ycfJ	b1110	0.28	+0.3
1,166,972	+	ycfJ	b1110	0.28	+0.9
1,166,972	+	ycfJ	b1110	0.28	+0.7
1,166,972	+	ycfJ	b1110	0.28	+0.4
1,166,980	+	ycfJ	b1110	0.29	+0.8
1,167,051	+	ycfJ	b1110	0.42	-1.9
1,167,051	+	ycfJ	b1110	0.42	+0.6
1,167,125	+	ycfJ	b1110	0.56	-1.5
1,167,132	+	ycfJ	b1110	0.57	-0.3
1,167,132	+	ycfJ	b1110	0.57	-0.5
1,167,243	+	ycfJ	b1110	0.78	-2.3
1,167,243	+	ycfJ	b1110	0.78	+0.5
1,167,243	+	ycfJ	b1110	0.78	-0.5
1,167,251	-	ycfJ	b1110	0.79	+0.3
1,167,263	-	ycfJ	b1110	0.82	+0.5
1,167,263	-	ycfJ	b1110	0.82	-0.4
1,167,362	-				+0.5
1,167,364	+				+0.7
1,167,364	+				-1.1