Strain Fitness in Escherichia coli BW25113 around b1104
Experiment: Cisplatin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,160,735 | - | -0.3 | |||
1,160,799 | + | +1.3 | |||
1,161,023 | + | -0.6 | |||
1,161,023 | + | +1.2 | |||
1,161,034 | + | +0.3 | |||
1,161,048 | - | -0.6 | |||
1,161,048 | - | -0.6 | |||
1,161,180 | - | ycfF | b1103 | 0.20 | -0.3 |
1,161,414 | - | ycfF | b1103 | 0.85 | +1.3 |
1,161,508 | - | ycfL | b1104 | 0.10 | +1.2 |
1,161,648 | - | ycfL | b1104 | 0.47 | +1.4 |
1,161,659 | + | ycfL | b1104 | 0.50 | -0.5 |
1,161,996 | + | ycfM | b1105 | 0.21 | -1.4 |
1,162,014 | + | ycfM | b1105 | 0.24 | -1.9 |
1,162,014 | + | ycfM | b1105 | 0.24 | +1.4 |
1,162,190 | - | ycfM | b1105 | 0.51 | -3.9 |
1,162,347 | - | ycfM | b1105 | 0.76 | -1.6 |
1,162,456 | - | -1.9 | |||
1,162,640 | + | ycfN | b1106 | 0.19 | -1.1 |
Or see this region's nucleotide sequence