Strain Fitness in Escherichia coli BW25113 around b1984
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,055,091 | + | yeeN | b1983 | 0.29 | +0.3 |
2,055,107 | + | yeeN | b1983 | 0.31 | +0.3 |
2,055,129 | + | yeeN | b1983 | 0.34 | +0.3 |
2,055,130 | + | yeeN | b1983 | 0.35 | +0.3 |
2,055,139 | + | yeeN | b1983 | 0.36 | +1.3 |
2,055,146 | + | yeeN | b1983 | 0.37 | +0.3 |
2,055,250 | + | yeeN | b1983 | 0.51 | +2.5 |
2,055,262 | + | yeeN | b1983 | 0.53 | -1.7 |
2,055,262 | + | yeeN | b1983 | 0.53 | -0.2 |
2,055,264 | + | yeeN | b1983 | 0.53 | +0.0 |
2,055,264 | + | yeeN | b1983 | 0.53 | -1.3 |
2,055,264 | + | yeeN | b1983 | 0.53 | -2.0 |
2,055,267 | + | yeeN | b1983 | 0.54 | +2.5 |
2,055,277 | + | yeeN | b1983 | 0.55 | -0.3 |
2,055,309 | + | yeeN | b1983 | 0.60 | +0.3 |
2,055,309 | + | yeeN | b1983 | 0.60 | +0.3 |
2,055,354 | + | yeeN | b1983 | 0.66 | +0.9 |
2,055,354 | + | yeeN | b1983 | 0.66 | -1.3 |
2,055,354 | + | yeeN | b1983 | 0.66 | +0.7 |
2,055,364 | + | yeeN | b1983 | 0.67 | -1.0 |
2,055,364 | + | yeeN | b1983 | 0.67 | -1.0 |
2,055,364 | + | yeeN | b1983 | 0.67 | +0.3 |
2,055,412 | + | yeeN | b1983 | 0.74 | +0.3 |
2,055,420 | - | yeeN | b1983 | 0.75 | +0.3 |
2,055,430 | + | yeeN | b1983 | 0.76 | -1.7 |
2,055,430 | + | yeeN | b1983 | 0.76 | +0.3 |
2,055,443 | + | yeeN | b1983 | 0.78 | +1.3 |
2,055,443 | + | yeeN | b1983 | 0.78 | -0.4 |
2,055,454 | + | yeeN | b1983 | 0.80 | +0.0 |
2,055,487 | + | yeeN | b1983 | 0.84 | -0.4 |
2,055,502 | + | yeeN | b1983 | 0.86 | +0.5 |
2,055,522 | + | yeeN | b1983 | 0.89 | -0.8 |
2,055,543 | + | -0.5 | |||
2,055,543 | + | -2.8 | |||
2,055,543 | + | -0.5 | |||
2,055,782 | - | -0.4 | |||
2,055,852 | - | +0.6 | |||
2,055,857 | - | +0.3 | |||
2,055,857 | - | +0.2 | |||
2,055,877 | - | -0.4 | |||
2,055,887 | + | -1.3 | |||
2,055,889 | + | -0.3 | |||
2,055,895 | - | -0.3 | |||
2,055,895 | - | +0.2 | |||
2,055,895 | - | -0.3 | |||
2,055,897 | - | +0.9 | |||
2,055,930 | - | -0.1 | |||
2,056,031 | - | -0.9 | |||
2,056,031 | - | -0.4 | |||
2,056,032 | - | +0.5 | |||
2,056,075 | - | asnW | b1984 | 0.32 | +1.2 |
2,056,312 | - | +1.7 | |||
2,056,322 | - | +0.1 | |||
2,056,322 | - | -0.4 | |||
2,056,326 | + | +0.3 | |||
2,056,445 | + | yeeO | b1985 | 0.15 | -2.3 |
2,056,480 | + | yeeO | b1985 | 0.17 | -0.5 |
2,056,557 | + | yeeO | b1985 | 0.22 | -0.7 |
2,056,702 | - | yeeO | b1985 | 0.32 | +0.9 |
2,056,725 | - | yeeO | b1985 | 0.33 | +0.0 |
2,056,725 | - | yeeO | b1985 | 0.33 | -0.3 |
2,056,738 | - | yeeO | b1985 | 0.34 | +2.9 |
2,056,738 | - | yeeO | b1985 | 0.34 | -0.1 |
2,056,750 | - | yeeO | b1985 | 0.35 | -0.4 |
2,056,758 | + | yeeO | b1985 | 0.36 | -0.3 |
2,056,758 | + | yeeO | b1985 | 0.36 | -0.7 |
2,056,807 | - | yeeO | b1985 | 0.39 | -0.1 |
2,056,857 | + | yeeO | b1985 | 0.42 | +1.3 |
2,056,857 | + | yeeO | b1985 | 0.42 | +0.3 |
2,056,880 | + | yeeO | b1985 | 0.44 | +0.3 |
2,056,893 | + | yeeO | b1985 | 0.45 | +0.6 |
2,056,895 | + | yeeO | b1985 | 0.45 | -2.3 |
2,056,895 | + | yeeO | b1985 | 0.45 | -1.3 |
2,057,027 | + | yeeO | b1985 | 0.54 | +0.3 |
2,057,027 | + | yeeO | b1985 | 0.54 | +0.3 |
2,057,033 | + | yeeO | b1985 | 0.54 | -0.7 |
2,057,035 | - | yeeO | b1985 | 0.54 | -0.0 |
2,057,120 | - | yeeO | b1985 | 0.60 | +0.2 |
Or see this region's nucleotide sequence