Strain Fitness in Escherichia coli BW25113 around b4012
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,211,358 | - | yjaA | b4011 | 0.26 | -0.0 |
4,211,358 | - | yjaA | b4011 | 0.26 | +0.4 |
4,211,402 | + | yjaA | b4011 | 0.38 | -0.2 |
4,211,605 | - | -0.2 | |||
4,211,659 | - | +0.7 | |||
4,211,767 | - | yjaB | b4012 | 0.14 | +0.3 |
4,211,973 | + | yjaB | b4012 | 0.61 | +0.6 |
4,211,994 | - | yjaB | b4012 | 0.66 | +2.4 |
4,211,994 | - | yjaB | b4012 | 0.66 | -0.8 |
4,212,254 | - | +1.1 | |||
4,212,689 | - | metA | b4013 | 0.42 | +0.1 |
4,212,908 | - | metA | b4013 | 0.65 | +0.3 |
4,212,908 | - | metA | b4013 | 0.65 | +0.5 |
4,212,957 | + | metA | b4013 | 0.70 | -0.1 |
4,213,008 | + | metA | b4013 | 0.76 | +0.2 |
4,213,008 | + | metA | b4013 | 0.76 | -0.5 |
4,213,008 | + | metA | b4013 | 0.76 | -0.2 |
4,213,061 | - | metA | b4013 | 0.82 | +0.7 |
4,213,068 | + | metA | b4013 | 0.82 | +0.3 |
Or see this region's nucleotide sequence