Strain Fitness in Agrobacterium fabrum C58 around Atu8097

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,963,026	+				+1.4
1,963,070	-				+0.2
1,963,157	+		Atu4790	0.12	+0.5
1,963,162	+		Atu4790	0.13	+0.1
1,963,165	-		Atu4790	0.13	+0.6
1,963,165	-		Atu4790	0.13	-0.3
1,963,165	-		Atu4790	0.13	+0.5
1,963,184	-		Atu4790	0.15	+0.2
1,963,188	+		Atu4790	0.16	+0.3
1,963,247	-		Atu4790	0.22	-0.1
1,963,424	+		Atu4790	0.40	+0.3
1,963,473	+		Atu4790	0.45	-0.4
1,963,493	+		Atu4790	0.47	+0.6
1,963,632	+		Atu4790	0.62	-0.2
1,963,838	+		Atu4790	0.83	+0.1
1,963,838	+		Atu4790	0.83	+0.1
1,963,867	-		Atu4790	0.86	+0.1
1,964,098	+				-1.2
1,964,114	-				-0.1
1,964,149	+				+0.2
1,964,152	-				+0.0
1,964,152	-				+0.3
1,964,223	+		Atu8097	0.11	+0.3
1,964,271	+		Atu8097	0.14	+0.3
1,964,284	+		Atu8097	0.15	+0.3
1,964,443	+		Atu8097	0.23	-0.5
1,964,446	-		Atu8097	0.23	-0.6
1,964,456	-		Atu8097	0.23	+0.6
1,964,560	-		Atu8097	0.29	+0.3
1,964,565	-		Atu8097	0.29	+0.3
1,964,580	+		Atu8097	0.30	+0.7
1,964,580	+		Atu8097	0.30	+0.2
1,964,614	-		Atu8097	0.31	-0.0
1,964,678	-		Atu8097	0.35	+0.2
1,964,700	+		Atu8097	0.36	+0.1
1,964,789	+		Atu8097	0.40	+0.3
1,964,790	+		Atu8097	0.40	+0.5
1,964,816	+		Atu8097	0.42	+0.0
1,964,824	-		Atu8097	0.42	-0.9
1,964,834	+		Atu8097	0.43	-0.6
1,964,838	-		Atu8097	0.43	+0.2
1,964,906	+		Atu8097	0.46	+0.4
1,964,939	+		Atu8097	0.48	-0.2
1,964,968	+		Atu8097	0.50	+0.1
1,965,004	-		Atu8097	0.51	+0.2
1,965,023	+		Atu8097	0.52	-0.5
1,965,031	-		Atu8097	0.53	+0.0
1,965,121	+		Atu8097	0.57	+0.2
1,965,137	+		Atu8097	0.58	+0.6
1,965,196	-		Atu8097	0.61	+0.1
1,965,196	-		Atu8097	0.61	-0.0
1,965,214	+		Atu8097	0.62	-0.1
1,965,222	-		Atu8097	0.63	-0.0
1,965,223	-		Atu8097	0.63	-0.5
1,965,315	+		Atu8097	0.67	+0.2
1,965,324	-		Atu8097	0.68	-0.5
1,965,367	-		Atu8097	0.70	-0.1
1,965,414	+		Atu8097	0.72	+0.8
1,965,480	+		Atu8097	0.76	+0.5
1,965,480	+		Atu8097	0.76	+0.1
1,965,516	+		Atu8097	0.78	+0.2
1,965,526	+		Atu8097	0.78	-0.0
1,965,526	+		Atu8097	0.78	-0.0
1,965,534	-		Atu8097	0.79	+0.2
1,965,581	-		Atu8097	0.81	+0.8
1,965,614	-		Atu8097	0.83	+0.3
1,965,631	+		Atu8097	0.84	+0.6
1,965,661	+		Atu8097	0.85	+0.3
1,965,751	+		Atu8097	0.90	+0.8
1,965,759	-				-0.4
1,965,769	-				-0.3
1,965,817	+				+0.0
1,965,914	+				-0.4
1,965,916	+				-0.4
1,965,957	-				-0.7
1,965,957	-				-0.0
1,966,006	+				+0.2
1,966,059	+		Atu4791	0.15	+0.7
1,966,059	+		Atu4791	0.15	+0.2
1,966,072	-		Atu4791	0.17	-0.1
1,966,263	+		Atu4791	0.56	+0.3
1,966,272	-		Atu4791	0.58	-0.5
1,966,434	+				+0.2
1,966,468	-				+0.3
1,966,468	-				-0.7
1,966,473	-				+0.1
1,966,482	+				-0.0
1,966,575	+				-0.3
1,966,634	+				+0.2
1,966,687	-				+0.2
1,966,755	-				+0.4
1,966,836	-				-0.1
1,966,844	-				+0.2
1,966,867	-				+0.1
1,966,867	-				+0.0
1,966,932	+				-0.8
1,966,932	+				-0.0
1,966,932	-				+0.0