Strain Fitness in Agrobacterium fabrum C58 around Atu4809

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,986,804	+		Atu4808	0.55	-0.2
1,986,810	+		Atu4808	0.55	+0.4
1,986,812	-		Atu4808	0.55	-0.0
1,986,834	-		Atu4808	0.57	-0.4
1,986,881	+		Atu4808	0.61	+0.1
1,986,881	+		Atu4808	0.61	+0.2
1,986,881	+		Atu4808	0.61	+0.5
1,986,973	+		Atu4808	0.68	-0.2
1,987,024	-		Atu4808	0.72	+0.2
1,987,151	+		Atu4808	0.83	+0.2
1,987,175	+		Atu4808	0.85	-0.1
1,987,209	+		Atu4808	0.87	-0.3
1,987,277	-				-1.5
1,987,285	+				+0.4
1,987,292	-				+0.2
1,987,292	-				+0.2
1,987,307	-				+0.5
1,987,370	+				+1.0
1,987,439	-				+0.3
1,987,502	+				+0.8
1,987,531	+				-0.2
1,987,601	+				-0.5
1,987,704	+				+2.3
1,987,712	+				+0.5
1,987,719	+				-0.1
1,987,720	-				+0.8
1,987,720	-				+0.3
1,987,728	+				+0.2
1,987,734	+				+0.0
1,987,734	+				+0.5
1,987,739	+				+0.2
1,987,874	+		Atu4809	0.20	+1.2
1,987,926	-		Atu4809	0.24	+0.1
1,987,947	-		Atu4809	0.26	-0.2
1,988,009	+		Atu4809	0.31	+1.8
1,988,017	-		Atu4809	0.32	+0.6
1,988,058	-		Atu4809	0.35	+0.5
1,988,103	-		Atu4809	0.39	+1.0
1,988,120	-		Atu4809	0.41	+0.5
1,988,166	+		Atu4809	0.44	+0.3
1,988,286	+		Atu4809	0.54	+0.4
1,988,315	-		Atu4809	0.57	+0.4
1,988,320	-		Atu4809	0.57	+0.3
1,988,322	+		Atu4809	0.57	+0.1
1,988,340	+		Atu4809	0.59	-0.5
1,988,388	+		Atu4809	0.63	+0.3
1,988,396	+		Atu4809	0.64	-0.2
1,988,396	-		Atu4809	0.64	+0.5
1,988,460	+		Atu4809	0.69	+0.8
1,988,641	-		Atu4809	0.84	+0.1
1,988,641	-		Atu4809	0.84	+0.5
1,988,742	+				-0.3
1,988,755	-				-0.2
1,988,765	-				-0.8
1,988,850	-				+0.7
1,988,870	+				-0.9
1,988,901	+				-0.0
1,988,909	-				-0.1
1,988,911	+				-1.0
1,988,987	-		Atu4810	0.11	+0.7
1,989,080	+		Atu4810	0.18	-0.3
1,989,164	-		Atu4810	0.25	+0.7
1,989,172	+		Atu4810	0.25	+0.8
1,989,205	+		Atu4810	0.28	+0.4
1,989,207	+		Atu4810	0.28	+0.3
1,989,262	-		Atu4810	0.32	-0.5
1,989,264	+		Atu4810	0.32	-0.1
1,989,264	+		Atu4810	0.32	-0.2
1,989,274	-		Atu4810	0.33	+0.4
1,989,346	-		Atu4810	0.38	+0.6
1,989,360	-		Atu4810	0.40	+0.4
1,989,360	-		Atu4810	0.40	+0.1
1,989,365	-		Atu4810	0.40	+0.3
1,989,429	-		Atu4810	0.45	+0.0
1,989,431	+		Atu4810	0.45	+0.0
1,989,439	-		Atu4810	0.46	+0.2
1,989,494	-		Atu4810	0.50	+0.2
1,989,593	-		Atu4810	0.57	-0.1
1,989,695	-		Atu4810	0.65	+1.2
1,989,701	+		Atu4810	0.65	-1.3
1,989,701	+		Atu4810	0.65	+0.2
1,989,702	-		Atu4810	0.65	+0.5
1,989,722	+		Atu4810	0.67	+0.2
1,989,722	+		Atu4810	0.67	-0.1
1,989,820	+		Atu4810	0.74	-1.8
1,989,821	-		Atu4810	0.74	+0.1