Strain Fitness in Agrobacterium fabrum C58 around Atu2588

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,564,179	-		Atu2587	0.54	-0.1
2,564,215	+		Atu2587	0.56	-1.3
2,564,218	-		Atu2587	0.56	+0.4
2,564,229	-		Atu2587	0.57	+0.8
2,564,397	-		Atu2587	0.65	-0.4
2,564,445	+		Atu2587	0.68	+0.1
2,564,485	+		Atu2587	0.70	-1.0
2,564,596	-		Atu2587	0.76	-0.4
2,564,643	-		Atu2587	0.78	-0.1
2,564,643	-		Atu2587	0.78	+0.0
2,564,643	-		Atu2587	0.78	+0.1
2,564,645	+		Atu2587	0.78	-0.4
2,564,669	-		Atu2587	0.80	-0.3
2,564,678	+		Atu2587	0.80	-0.2
2,564,686	-		Atu2587	0.81	-0.1
2,564,686	-		Atu2587	0.81	+0.1
2,564,727	+		Atu2587	0.83	+0.7
2,564,747	+		Atu2587	0.84	+0.0
2,564,755	-		Atu2587	0.84	-0.5
2,564,798	-		Atu2587	0.86	+0.1
2,564,924	-				-0.6
2,564,994	+				-0.9
2,565,121	+				-0.3
2,565,344	+		Atu2588	0.29	-0.3
2,565,368	+		Atu2588	0.31	-0.3
2,565,368	+		Atu2588	0.31	+0.0
2,565,376	-		Atu2588	0.32	-0.1
2,565,399	+		Atu2588	0.34	+0.3
2,565,438	+		Atu2588	0.38	+0.4
2,565,448	-		Atu2588	0.39	-0.4
2,565,469	+		Atu2588	0.41	+0.5
2,565,474	+		Atu2588	0.42	+0.2
2,565,596	+		Atu2588	0.54	-0.6
2,565,634	+		Atu2588	0.58	+0.2
2,565,762	+		Atu2588	0.71	-0.3
2,565,770	-		Atu2588	0.71	+1.2
2,565,770	-		Atu2588	0.71	-1.1
2,565,770	-		Atu2588	0.71	-0.3
2,565,770	-		Atu2588	0.71	+0.3
2,565,838	-		Atu2588	0.78	+0.6
2,565,955	-				-0.0
2,565,981	+				-0.2
2,565,988	+				+0.2
2,566,038	-				+0.3
2,566,081	+				-1.5
2,566,245	-		Atu2589	0.16	-1.1
2,566,263	-		Atu2589	0.18	-1.0
2,566,263	-		Atu2589	0.18	+0.1
2,566,432	-		Atu2589	0.32	-0.2
2,566,605	+		Atu2589	0.47	-0.5
2,566,636	+		Atu2589	0.50	-1.4
2,566,694	+		Atu2589	0.55	+0.0
2,566,694	+		Atu2589	0.55	-0.0
2,566,694	+		Atu2589	0.55	+0.1
2,566,694	+		Atu2589	0.55	-0.0
2,566,694	+		Atu2589	0.55	+0.5
2,566,702	-		Atu2589	0.55	-0.2
2,566,757	+		Atu2589	0.60	-0.2
2,566,793	-		Atu2589	0.63	-0.0
2,566,828	-		Atu2589	0.66	+0.0
2,566,844	+		Atu2589	0.67	-0.2
2,566,852	-		Atu2589	0.68	-1.0
2,566,956	+		Atu2589	0.77	+1.0
2,566,988	-		Atu2589	0.80	+0.2