Strain Fitness in Escherichia coli BW25113 around b1199
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,247,349 | + | dhaM | b1198 | 0.30 | -0.1 |
1,247,376 | + | dhaM | b1198 | 0.32 | -0.1 |
1,247,377 | + | dhaM | b1198 | 0.32 | +0.9 |
1,247,377 | - | dhaM | b1198 | 0.32 | -0.4 |
1,247,497 | - | dhaM | b1198 | 0.41 | -0.6 |
1,247,566 | - | dhaM | b1198 | 0.46 | -0.9 |
1,247,604 | - | dhaM | b1198 | 0.48 | -1.1 |
1,247,664 | - | dhaM | b1198 | 0.53 | +0.3 |
1,247,683 | + | dhaM | b1198 | 0.54 | +0.8 |
1,247,683 | + | dhaM | b1198 | 0.54 | +0.3 |
1,247,892 | + | dhaM | b1198 | 0.69 | +0.3 |
1,247,923 | + | dhaM | b1198 | 0.71 | -0.0 |
1,247,932 | - | dhaM | b1198 | 0.71 | -0.5 |
1,247,938 | + | dhaM | b1198 | 0.72 | +3.5 |
1,248,025 | + | dhaM | b1198 | 0.78 | +0.8 |
1,248,120 | + | dhaM | b1198 | 0.85 | +0.2 |
1,248,131 | - | dhaM | b1198 | 0.85 | -1.1 |
1,248,142 | + | dhaM | b1198 | 0.86 | +0.1 |
1,248,251 | + | +0.3 | |||
1,248,251 | + | +0.7 | |||
1,248,305 | + | +0.4 | |||
1,248,472 | + | dhaL | b1199 | 0.20 | -0.5 |
1,248,497 | - | dhaL | b1199 | 0.24 | -0.9 |
1,248,512 | - | dhaL | b1199 | 0.26 | -0.5 |
1,248,571 | + | dhaL | b1199 | 0.35 | -0.9 |
1,248,907 | - | dhaL | b1199 | 0.88 | -0.7 |
1,248,907 | - | dhaL | b1199 | 0.88 | -0.9 |
1,248,967 | + | -0.0 | |||
1,249,100 | + | b1200 | b1200 | 0.10 | +0.3 |
1,249,100 | + | b1200 | b1200 | 0.10 | -0.1 |
1,249,132 | + | b1200 | b1200 | 0.13 | +0.5 |
1,249,317 | + | b1200 | b1200 | 0.30 | +0.1 |
1,249,446 | + | b1200 | b1200 | 0.42 | -0.5 |
1,249,487 | - | b1200 | b1200 | 0.46 | -0.2 |
1,249,531 | + | b1200 | b1200 | 0.50 | +0.5 |
1,249,539 | - | b1200 | b1200 | 0.51 | +0.1 |
1,249,544 | - | b1200 | b1200 | 0.52 | -0.8 |
1,249,544 | - | b1200 | b1200 | 0.52 | +0.2 |
1,249,612 | - | b1200 | b1200 | 0.58 | +0.8 |
1,249,710 | - | b1200 | b1200 | 0.67 | -0.4 |
1,249,761 | + | b1200 | b1200 | 0.72 | -0.4 |
1,249,761 | + | b1200 | b1200 | 0.72 | +0.9 |
1,249,792 | + | b1200 | b1200 | 0.75 | +0.0 |
1,249,978 | - | -0.1 |
Or see this region's nucleotide sequence