Strain Fitness in Agrobacterium fabrum C58 around Atu4811

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,989,429	-		Atu4810	0.45	+0.0
1,989,431	+		Atu4810	0.45	-1.3
1,989,439	-		Atu4810	0.46	+0.2
1,989,494	-		Atu4810	0.50	-0.4
1,989,593	-		Atu4810	0.57	+0.3
1,989,695	-		Atu4810	0.65	+2.0
1,989,701	+		Atu4810	0.65	-0.6
1,989,701	+		Atu4810	0.65	-0.1
1,989,702	-		Atu4810	0.65	+0.4
1,989,722	+		Atu4810	0.67	+0.3
1,989,722	+		Atu4810	0.67	-0.5
1,989,820	+		Atu4810	0.74	-1.7
1,989,821	-		Atu4810	0.74	+0.7
1,989,848	-		Atu4810	0.77	+0.9
1,989,876	+		Atu4810	0.79	-0.3
1,989,938	-		Atu4810	0.83	-0.0
1,989,941	+		Atu4810	0.84	-0.1
1,989,964	+		Atu4810	0.85	-0.4
1,989,988	+		Atu4810	0.87	-0.4
1,989,988	+		Atu4810	0.87	-0.2
1,990,018	+		Atu4810	0.89	-0.1
1,990,050	+				-0.5
1,990,069	+				-0.1
1,990,117	+				+0.1
1,990,124	+				+0.5
1,990,223	+				+0.5
1,990,252	-				-1.5
1,990,254	+				-0.4
1,990,254	+				+0.3
1,990,262	-				-1.4
1,990,291	+				+1.1
1,990,335	-				-0.6
1,990,337	-				-0.6
1,990,362	+				-1.3
1,990,424	+				+0.0
1,990,424	+				+2.3
1,990,432	-				+0.0
1,990,434	-				+0.5
1,990,451	-				-0.0
1,990,532	+		Atu4811	0.10	+0.0
1,990,545	-		Atu4811	0.12	+0.6
1,990,631	+		Atu4811	0.19	+1.3
1,990,671	+		Atu4811	0.23	+0.7
1,990,693	+		Atu4811	0.25	-0.4
1,990,708	-		Atu4811	0.26	+1.0
1,990,754	+		Atu4811	0.30	+0.9
1,990,799	+		Atu4811	0.34	-0.0
1,990,926	-		Atu4811	0.45	+1.9
1,990,973	-		Atu4811	0.49	-0.3
1,990,986	+		Atu4811	0.50	-1.6
1,991,018	-		Atu4811	0.53	-0.3
1,991,041	+		Atu4811	0.55	+0.8
1,991,149	+		Atu4811	0.64	+0.0
1,991,155	-		Atu4811	0.65	+0.0
1,991,263	+		Atu4811	0.74	-0.1
1,991,279	-		Atu4811	0.76	-1.1
1,991,368	+		Atu4811	0.83	+0.8
1,991,412	+		Atu4811	0.87	+0.2
1,991,419	-		Atu4811	0.88	+0.1
1,991,431	+		Atu4811	0.89	-0.0
1,991,497	+				+0.2
1,991,586	-				+0.3
1,991,621	+				+1.0
1,991,621	+				-0.3
1,991,621	+				+0.5
1,991,621	+				+1.0
1,991,621	+				-0.1
1,991,621	+				+0.4
1,991,629	-				+0.3
1,991,657	-		Atu4812	0.13	-0.3
1,991,707	-		Atu4812	0.20	+0.2
1,991,820	-		Atu4812	0.36	-0.0
1,991,876	-		Atu4812	0.44	+0.3
1,991,920	+		Atu4812	0.51	-0.5
1,991,933	-		Atu4812	0.53	+0.1
1,991,956	+		Atu4812	0.56	-1.7
1,991,963	+		Atu4812	0.57	-0.4
1,991,995	+		Atu4812	0.62	-0.2
1,991,996	+		Atu4812	0.62	+0.6
1,992,003	-		Atu4812	0.63	-0.1
1,992,003	-		Atu4812	0.63	+1.1
1,992,004	-		Atu4812	0.63	-0.6
1,992,090	+		Atu4812	0.75	+0.2
1,992,132	-		Atu4812	0.81	-0.7
1,992,173	-		Atu4812	0.87	+0.8
1,992,197	+				+0.3
1,992,294	+				-0.8
1,992,302	-				+0.0
1,992,439	+				-0.2
1,992,444	+		Atu4813	0.10	+0.5
1,992,447	-		Atu4813	0.10	-0.2
1,992,454	+		Atu4813	0.11	+0.0
1,992,454	+		Atu4813	0.11	-0.2
1,992,454	+		Atu4813	0.11	+0.5
1,992,462	-		Atu4813	0.12	-0.6
1,992,489	-		Atu4813	0.14	-0.3
1,992,510	+		Atu4813	0.16	-0.1