Strain Fitness in Agrobacterium fabrum C58 around Atu4605

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,749,534	-				-0.6
1,749,592	-				-1.0
1,749,614	+				-0.6
1,749,774	-		Atu4604	0.22	+0.1
1,749,788	+		Atu4604	0.23	+0.2
1,749,803	-		Atu4604	0.25	-0.8
1,749,902	-		Atu4604	0.35	-0.1
1,749,928	-		Atu4604	0.38	+0.8
1,749,928	-		Atu4604	0.38	-2.1
1,749,928	-		Atu4604	0.38	+0.1
1,749,951	-		Atu4604	0.41	-0.2
1,749,970	+		Atu4604	0.43	+0.6
1,750,030	+		Atu4604	0.49	+0.1
1,750,038	-		Atu4604	0.50	+1.0
1,750,192	-		Atu4604	0.67	-0.5
1,750,247	-		Atu4604	0.73	-0.2
1,750,281	-		Atu4604	0.76	+0.3
1,750,303	+		Atu4604	0.79	-0.5
1,750,304	-		Atu4604	0.79	-2.3
1,750,356	-		Atu4604	0.84	-0.5
1,750,412	+				+0.0
1,750,590	+		Atu4605	0.36	+1.4
1,750,622	-		Atu4605	0.48	+0.7
1,750,627	+		Atu4605	0.49	-0.2
1,750,683	+		Atu4605	0.70	+0.0
1,750,691	-		Atu4605	0.73	+0.4
1,750,724	+		Atu4605	0.86	-0.0
1,750,771	-				-0.2
1,750,781	-				-0.3
1,750,825	+				+0.8
1,750,825	+				+1.4
1,750,825	+				-2.7
1,750,833	+				+0.0
1,750,833	-				+0.1
1,750,833	-				+0.3
1,750,833	-				+0.3
1,750,841	+				+0.1
1,750,841	+				+0.0
1,750,876	+				+0.8
1,750,911	+				-0.5
1,750,911	+				-0.1
1,750,911	+				+1.0
1,750,918	+				-0.7
1,750,919	-				+0.1
1,750,919	-				-1.1
1,750,926	-				+0.3
1,750,946	-				-0.4
1,751,002	-				-0.1
1,751,013	+				+0.3
1,751,013	+				+0.8
1,751,057	-				+0.1
1,751,250	+		Atu4606	0.12	+0.2
1,751,266	+		Atu4606	0.13	-1.8
1,751,357	+		Atu4606	0.18	+0.2
1,751,549	+		Atu4606	0.30	+0.7
1,751,561	+		Atu4606	0.31	+0.1
1,751,620	+		Atu4606	0.35	+0.4
1,751,662	-		Atu4606	0.37	-0.2
1,751,705	+		Atu4606	0.40	-0.0
1,751,713	-		Atu4606	0.40	-0.2