Strain Fitness in Agrobacterium fabrum C58 around Atu4270

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,394,577	+		Atu4268	0.89	+0.3
1,394,646	+				+0.5
1,394,652	+				+0.2
1,394,652	+				+0.6
1,394,660	-				-0.2
1,394,768	+				-0.4
1,394,821	+		Atu4269	0.14	-0.2
1,394,821	+		Atu4269	0.14	+0.2
1,394,877	-		Atu4269	0.21	+0.0
1,394,908	-		Atu4269	0.25	+1.5
1,394,926	+		Atu4269	0.27	-0.3
1,394,931	+		Atu4269	0.27	+0.3
1,394,934	-		Atu4269	0.28	+0.4
1,394,962	-		Atu4269	0.31	-0.2
1,395,091	-		Atu4269	0.46	+0.2
1,395,185	+		Atu4269	0.57	-0.2
1,395,187	-		Atu4269	0.58	-0.8
1,395,228	+		Atu4269	0.62	-1.0
1,395,268	+		Atu4269	0.67	+0.9
1,395,303	-		Atu4269	0.71	+0.4
1,395,362	+		Atu4269	0.78	-0.7
1,395,422	-		Atu4269	0.85	+0.0
1,395,438	+		Atu4269	0.87	+0.2
1,395,439	-		Atu4269	0.87	-0.3
1,395,469	+				-0.2
1,395,484	+				+0.1
1,395,524	-				+0.0
1,395,579	+				-0.5
1,395,629	+				-0.1
1,395,714	-		Atu4270	0.24	+0.2
1,395,754	-		Atu4270	0.30	+0.6
1,395,806	-		Atu4270	0.39	+0.0
1,395,822	+		Atu4270	0.42	+0.7
1,395,830	-		Atu4270	0.43	+0.1
1,395,830	-		Atu4270	0.43	+1.3
1,395,830	-		Atu4270	0.43	+1.2
1,395,832	+		Atu4270	0.44	+0.8
1,395,840	-		Atu4270	0.45	+0.4
1,395,995	+		Atu4270	0.71	+0.1
1,396,032	+		Atu4270	0.77	-0.3
1,396,107	+		Atu4270	0.90	-0.1
1,396,132	-				+0.5
1,396,210	-				-0.3
1,396,250	+				-0.2
1,396,266	-				-0.1
1,396,324	+				-0.2
1,396,324	+				+0.4
1,396,331	-				+0.2
1,396,364	+				-0.0
1,396,474	-		Atu4271	0.21	-0.4
1,396,499	-		Atu4271	0.24	-0.0
1,396,563	-		Atu4271	0.31	+0.1
1,396,602	+		Atu4271	0.36	-0.1
1,396,604	+		Atu4271	0.36	+0.5
1,396,620	-		Atu4271	0.38	+0.3
1,396,658	+		Atu4271	0.42	+1.5
1,396,658	+		Atu4271	0.42	+0.3
1,396,658	+		Atu4271	0.42	-0.8
1,396,658	-		Atu4271	0.42	+0.8
1,396,683	+		Atu4271	0.45	+0.2
1,396,822	+		Atu4271	0.61	-0.2
1,396,882	-		Atu4271	0.67	+0.0
1,397,000	+		Atu4271	0.81	-0.4
1,397,088	-				+0.1
1,397,111	+				-0.2
1,397,151	-				-0.7