Strain Fitness in Agrobacterium fabrum C58 around Atu1042

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,032,887	+				-0.1
1,032,947	-		Atu1041	0.13	-0.6
1,033,031	-		Atu1041	0.25	+1.2
1,033,040	-		Atu1041	0.26	-0.0
1,033,203	-		Atu1041	0.48	-0.1
1,033,239	-		Atu1041	0.53	+0.0
1,033,249	-		Atu1041	0.55	-0.2
1,033,337	+		Atu1041	0.67	-0.1
1,033,345	-		Atu1041	0.68	+0.6
1,033,427	+		Atu1041	0.79	-0.6
1,033,427	+		Atu1041	0.79	-0.3
1,033,771	+				-0.5
1,033,994	-		Atu1042	0.24	+0.9
1,034,017	+		Atu1042	0.27	+0.1
1,034,118	+		Atu1042	0.39	+0.7
1,034,226	-		Atu1042	0.51	+0.2
1,034,226	-		Atu1042	0.51	-0.6
1,034,226	-		Atu1042	0.51	+0.1
1,034,226	-		Atu1042	0.51	+0.5
1,034,319	-		Atu1042	0.63	+1.0
1,034,389	-		Atu1042	0.71	-1.1
1,034,399	-		Atu1042	0.72	+0.1
1,034,597	+				-2.4
1,034,607	-				+0.4
1,034,652	-				+0.7
1,034,685	-				-0.0
1,034,743	+		Atu1043	0.15	-0.8
1,034,969	-		Atu1043	0.50	-0.1
1,035,020	-		Atu1043	0.58	+0.2
1,035,124	-		Atu1043	0.74	-0.1
1,035,177	-		Atu1043	0.82	-0.1
1,035,196	-		Atu1043	0.85	+0.4
1,035,244	-				-0.5
1,035,343	+				-0.3
1,035,392	-				+0.1
1,035,392	-				-1.5
1,035,538	-				-0.7
1,035,555	-		Atu1044	0.10	+0.3
1,035,555	-		Atu1044	0.10	+0.3
1,035,556	-		Atu1044	0.10	+0.1
1,035,580	-		Atu1044	0.11	+0.1
1,035,583	+		Atu1044	0.11	-0.5
1,035,613	+		Atu1044	0.12	-0.5