Strain Fitness in Escherichia coli BW25113 around b2545

Experiment: Ciprofloxacin Hydrochloride 0.0024 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ciprofloxacin Hydrochloride 0.0024 mM
2,671,736	+	yphA	b2543	0.87	+0.1
2,671,736	+	yphA	b2543	0.87	-1.3
2,671,789	+				-2.7
2,671,890	-				-0.1
2,671,959	-	yphB	b2544	0.14	-0.2
2,672,031	-	yphB	b2544	0.22	-0.1
2,672,031	-	yphB	b2544	0.22	+1.1
2,672,053	+	yphB	b2544	0.25	-0.0
2,672,081	+	yphB	b2544	0.28	-0.6
2,672,084	-	yphB	b2544	0.28	-1.3
2,672,165	-	yphB	b2544	0.37	+1.3
2,672,165	-	yphB	b2544	0.37	-0.7
2,672,380	-	yphB	b2544	0.62	-1.0
2,672,394	+	yphB	b2544	0.64	-2.1
2,672,394	+	yphB	b2544	0.64	+0.3
2,672,423	+	yphB	b2544	0.67	+1.4
2,672,471	-	yphB	b2544	0.73	-1.2
2,672,471	-	yphB	b2544	0.73	+1.5
2,672,690	+				+0.1
2,672,697	+				-3.2
2,672,703	-				-0.5
2,672,704	-				-2.4
2,672,705	-				-1.3
2,672,764	+				-0.3
2,672,870	+	yphC	b2545	0.14	-3.7
2,672,906	-	yphC	b2545	0.17	-0.7
2,672,908	+	yphC	b2545	0.18	-0.5
2,672,988	+	yphC	b2545	0.25	+0.9
2,673,134	-	yphC	b2545	0.39	-0.3
2,673,165	+	yphC	b2545	0.42	-1.3
2,673,173	+	yphC	b2545	0.42	-0.6
2,673,173	+	yphC	b2545	0.42	+0.0
2,673,231	+	yphC	b2545	0.48	-0.0
2,673,231	+	yphC	b2545	0.48	-1.1
2,673,289	+	yphC	b2545	0.53	-0.4
2,673,578	-	yphC	b2545	0.81	-1.8
2,673,578	-	yphC	b2545	0.81	-3.0
2,673,578	-	yphC	b2545	0.81	-2.0
2,673,693	+				-1.2
2,673,800	-				-0.2
2,673,959	+	yphD	b2546	0.11	-2.8
2,674,037	+	yphD	b2546	0.19	+1.3
2,674,303	-	yphD	b2546	0.45	+0.6
2,674,305	+	yphD	b2546	0.46	-0.2
2,674,308	-	yphD	b2546	0.46	+0.9
2,674,350	+	yphD	b2546	0.50	-3.1
2,674,350	+	yphD	b2546	0.50	+1.7
2,674,350	+	yphD	b2546	0.50	-1.8
2,674,358	-	yphD	b2546	0.51	+0.2
2,674,358	-	yphD	b2546	0.51	-3.3
2,674,358	-	yphD	b2546	0.51	+0.1
2,674,381	+	yphD	b2546	0.53	+1.0
2,674,457	+	yphD	b2546	0.61	+0.8
2,674,457	+	yphD	b2546	0.61	+0.1
2,674,466	-	yphD	b2546	0.62	-2.7
2,674,466	-	yphD	b2546	0.62	+0.0
2,674,476	-	yphD	b2546	0.63	+1.7
2,674,532	-	yphD	b2546	0.68	-0.8