Experiment: benzoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4634 and PP_4635 are separated by 143 nucleotides PP_4635 and PP_4636 are separated by 302 nucleotides
PP_4634: PP_4634 - putative hydrolase, alpha/beta fold family, at 5,256,893 to 5,257,801
_4634
PP_4635: PP_4635 - trans-2-enoyl-CoA reductase (NAD(+)), at 5,257,945 to 5,259,156
_4635
PP_4636: PP_4636 - acetyl-CoA acetyltransferase, at 5,259,459 to 5,260,637
_4636
Position (kb) 5257
5258
5259
5260 Strain fitness (log2 ratio) -1
0
1
2 at 5257.067 kb on + strand, within PP_4634 at 5257.067 kb on + strand, within PP_4634 at 5257.068 kb on - strand, within PP_4634 at 5257.068 kb on - strand, within PP_4634 at 5257.072 kb on - strand, within PP_4634 at 5257.164 kb on - strand, within PP_4634 at 5257.211 kb on - strand, within PP_4634 at 5257.356 kb on + strand, within PP_4634 at 5257.356 kb on + strand, within PP_4634 at 5257.356 kb on + strand, within PP_4634 at 5257.356 kb on + strand, within PP_4634 at 5257.356 kb on + strand, within PP_4634 at 5257.357 kb on - strand, within PP_4634 at 5257.357 kb on - strand, within PP_4634 at 5257.359 kb on + strand, within PP_4634 at 5257.359 kb on + strand, within PP_4634 at 5257.360 kb on - strand, within PP_4634 at 5257.430 kb on + strand, within PP_4634 at 5257.431 kb on - strand, within PP_4634 at 5257.594 kb on - strand, within PP_4634 at 5257.594 kb on - strand, within PP_4634 at 5257.594 kb on - strand, within PP_4634 at 5257.599 kb on + strand, within PP_4634 at 5257.599 kb on + strand, within PP_4634 at 5257.599 kb on + strand at 5257.599 kb on + strand, within PP_4634 at 5257.599 kb on + strand, within PP_4634 at 5257.599 kb on + strand, within PP_4634 at 5257.600 kb on - strand, within PP_4634 at 5257.633 kb on - strand, within PP_4634 at 5257.651 kb on - strand, within PP_4634 at 5257.746 kb on + strand at 5257.796 kb on - strand at 5257.796 kb on - strand at 5257.796 kb on - strand at 5257.833 kb on - strand at 5257.854 kb on - strand at 5257.883 kb on + strand at 5257.883 kb on + strand at 5257.939 kb on - strand at 5257.947 kb on - strand at 5259.178 kb on - strand at 5259.230 kb on - strand at 5259.253 kb on + strand at 5259.253 kb on + strand at 5259.253 kb on + strand at 5259.254 kb on - strand at 5259.254 kb on - strand at 5259.254 kb on - strand at 5259.339 kb on - strand at 5259.404 kb on - strand at 5259.432 kb on + strand at 5259.826 kb on - strand, within PP_4636 at 5259.826 kb on - strand, within PP_4636 at 5259.921 kb on + strand, within PP_4636 at 5259.921 kb on + strand, within PP_4636 at 5259.921 kb on + strand, within PP_4636 at 5259.922 kb on - strand, within PP_4636 at 5259.922 kb on - strand, within PP_4636 at 5259.961 kb on - strand, within PP_4636 at 5259.962 kb on - strand, within PP_4636
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic (C) remove 5,257,067 + PP_4634 0.19 +0.2 5,257,067 + PP_4634 0.19 +0.4 5,257,068 - PP_4634 0.19 +0.7 5,257,068 - PP_4634 0.19 +0.5 5,257,072 - PP_4634 0.20 -0.9 5,257,164 - PP_4634 0.30 +0.0 5,257,211 - PP_4634 0.35 +0.7 5,257,356 + PP_4634 0.51 +0.5 5,257,356 + PP_4634 0.51 -0.0 5,257,356 + PP_4634 0.51 -0.0 5,257,356 + PP_4634 0.51 +1.1 5,257,356 + PP_4634 0.51 +0.2 5,257,357 - PP_4634 0.51 +0.6 5,257,357 - PP_4634 0.51 -0.2 5,257,359 + PP_4634 0.51 -0.3 5,257,359 + PP_4634 0.51 -1.3 5,257,360 - PP_4634 0.51 -0.1 5,257,430 + PP_4634 0.59 +0.5 5,257,431 - PP_4634 0.59 -0.6 5,257,594 - PP_4634 0.77 +0.5 5,257,594 - PP_4634 0.77 -0.1 5,257,594 - PP_4634 0.77 +0.5 5,257,599 + PP_4634 0.78 +0.2 5,257,599 + PP_4634 0.78 +0.8 5,257,599 + +0.1 5,257,599 + PP_4634 0.78 +0.2 5,257,599 + PP_4634 0.78 +0.3 5,257,599 + PP_4634 0.78 -1.1 5,257,600 - PP_4634 0.78 -0.1 5,257,633 - PP_4634 0.81 -1.5 5,257,651 - PP_4634 0.83 -0.6 5,257,746 + +0.1 5,257,796 - -0.1 5,257,796 - +0.8 5,257,796 - -0.2 5,257,833 - -0.2 5,257,854 - -0.7 5,257,883 + +0.3 5,257,883 + +0.7 5,257,939 - +0.1 5,257,947 - -0.6 5,259,178 - +0.8 5,259,230 - -0.1 5,259,253 + -1.0 5,259,253 + -0.3 5,259,253 + -0.9 5,259,254 - -0.6 5,259,254 - -0.4 5,259,254 - -0.9 5,259,339 - +0.2 5,259,404 - +0.6 5,259,432 + +2.3 5,259,826 - PP_4636 0.31 +0.1 5,259,826 - PP_4636 0.31 +0.2 5,259,921 + PP_4636 0.39 +0.1 5,259,921 + PP_4636 0.39 -0.0 5,259,921 + PP_4636 0.39 -0.4 5,259,922 - PP_4636 0.39 -1.6 5,259,922 - PP_4636 0.39 +0.1 5,259,961 - PP_4636 0.43 +0.7 5,259,962 - PP_4636 0.43 -0.1
Or see this region's nucleotide sequence