Strain Fitness in Escherichia coli BW25113 around b3500

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,643,333	+				-1.1
3,643,341	-				-0.3
3,643,351	-				-0.1
3,643,399	+				+0.7
3,643,399	+				-0.6
3,643,407	-				+0.2
3,643,407	-				-0.1
3,643,409	+				+0.1
3,643,435	-				+0.2
3,643,435	-				+0.3
3,643,435	-				-0.7
3,643,468	+				-0.1
3,643,537	-	yhiR	b3499	0.15	-0.1
3,643,541	-	yhiR	b3499	0.16	-0.1
3,643,541	-	yhiR	b3499	0.16	+1.1
3,643,603	+	yhiR	b3499	0.23	+0.5
3,643,603	+	yhiR	b3499	0.23	-0.3
3,643,723	+	yhiR	b3499	0.37	+0.0
3,643,745	+	yhiR	b3499	0.40	-2.0
3,643,753	-	yhiR	b3499	0.41	+0.5
3,643,941	-	yhiR	b3499	0.63	-0.6
3,643,955	+	yhiR	b3499	0.65	-0.6
3,643,987	+	yhiR	b3499	0.69	-0.5
3,643,992	+	yhiR	b3499	0.69	-0.9
3,644,036	+	yhiR	b3499	0.74	+0.3
3,644,086	+	yhiR	b3499	0.80	+2.0
3,644,086	+	yhiR	b3499	0.80	-0.7
3,644,092	-	yhiR	b3499	0.81	+0.2
3,644,110	-	yhiR	b3499	0.83	+0.1
3,644,110	-	yhiR	b3499	0.83	-0.7
3,644,116	-	yhiR	b3499	0.84	+0.4
3,644,182	+				-0.3
3,644,224	+				+0.1
3,644,232	-				-0.3
3,644,233	-				+0.1
3,644,233	-				+0.5
3,644,280	-				-0.9
3,644,291	-				+0.3
3,644,309	-				+0.7
3,644,322	-				+0.2
3,644,391	+				+0.1
3,644,391	+				-0.5
3,644,519	-	gor	b3500	0.15	-0.3
3,644,566	-	gor	b3500	0.18	-1.1
3,644,743	+				+1.7
3,645,079	-	gor	b3500	0.56	-0.8
3,645,079	-	gor	b3500	0.56	+1.1
3,645,348	+	gor	b3500	0.76	+0.9
3,645,453	+	gor	b3500	0.84	+2.3
3,645,690	+				+0.3
3,645,755	+	dinQ	b4613	0.21	-0.5
3,645,781	+	dinQ	b4613	0.41	+0.2
3,645,862	+				-0.2
3,645,898	+				-1.1
3,645,898	+				-0.2
3,645,918	-				+0.5
3,645,930	+				+0.5
3,645,956	+				-0.0
3,645,976	+				+0.7
3,646,094	+				+0.2
3,646,100	+				+0.6
3,646,100	+				+1.7
3,646,107	-				+0.4
3,646,117	-				+0.6
3,646,234	+				-0.6
3,646,238	+				-0.4
3,646,249	+				+0.5
3,646,291	+				+0.1
3,646,325	-				+1.3
3,646,325	-				+0.2
3,646,338	-				+0.9
3,646,367	-				+1.3
3,646,560	+				-0.3
3,646,602	+	arsR	b3501	0.14	+0.7
3,646,655	+	arsR	b3501	0.29	-0.5
3,646,655	+	arsR	b3501	0.29	-0.4
3,646,663	-	arsR	b3501	0.32	-0.2
3,646,663	-	arsR	b3501	0.32	+0.4
3,646,663	-	arsR	b3501	0.32	+0.5
3,646,663	-	arsR	b3501	0.32	+0.2
3,646,666	-	arsR	b3501	0.32	-0.5
3,646,666	-	arsR	b3501	0.32	+0.5
3,646,674	-	arsR	b3501	0.35	-0.4