Strain Fitness in Escherichia coli BW25113 around b1798

Experiment: Trimethoprim 0.005 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trimethoprim 0.005 mM
1,877,145	-	yeaQ	b1795	0.46	-0.3
1,877,145	-	yeaQ	b1795	0.46	-1.6
1,877,174	-	yeaQ	b1795	0.57	+1.0
1,877,175	-	yeaQ	b1795	0.58	-0.3
1,877,260	+				+0.7
1,877,433	+				-1.1
1,877,476	+	yoaG	b1796	0.27	-1.4
1,877,476	+	yoaG	b1796	0.27	-0.8
1,877,484	-	yoaG	b1796	0.31	-0.6
1,877,513	-	yoaG	b1796	0.47	-0.3
1,877,571	-	yoaG	b1796	0.79	+0.2
1,877,602	-				-0.0
1,877,658	-	yeaR	b1797	0.12	-1.1
1,877,663	+	yeaR	b1797	0.14	-0.4
1,877,663	+	yeaR	b1797	0.14	-1.1
1,877,714	+	yeaR	b1797	0.28	-1.3
1,877,715	-	yeaR	b1797	0.28	+0.4
1,877,764	+	yeaR	b1797	0.42	-1.0
1,877,765	+	yeaR	b1797	0.42	-0.7
1,877,765	+	yeaR	b1797	0.42	-0.3
1,877,791	+	yeaR	b1797	0.49	+1.3
1,877,804	-	yeaR	b1797	0.53	-0.4
1,877,804	-	yeaR	b1797	0.53	+3.3
1,877,804	-	yeaR	b1797	0.53	-1.9
1,877,814	-	yeaR	b1797	0.56	+0.7
1,877,859	-	yeaR	b1797	0.68	-1.7
1,877,985	+				-0.7
1,878,018	-				+0.4
1,878,085	-				+0.7
1,878,142	-				+0.1
1,878,142	-				-1.4
1,878,186	+				+2.3
1,878,236	+	yeaS	b1798	0.14	+0.7
1,878,236	+	yeaS	b1798	0.14	+2.3
1,878,236	+	yeaS	b1798	0.14	+2.3
1,878,236	+	yeaS	b1798	0.14	+1.3
1,878,244	-	yeaS	b1798	0.15	+1.3
1,878,244	-	yeaS	b1798	0.15	-1.3
1,878,244	-	yeaS	b1798	0.15	+1.9
1,878,244	-	yeaS	b1798	0.15	+3.3
1,878,303	-	yeaS	b1798	0.25	-0.8
1,878,340	+	yeaS	b1798	0.31	+0.5
1,878,363	+	yeaS	b1798	0.34	+1.7
1,878,363	+	yeaS	b1798	0.34	+1.3
1,878,364	-	yeaS	b1798	0.34	+3.4
1,878,388	-	yeaS	b1798	0.38	-0.7
1,878,414	-	yeaS	b1798	0.42	+0.2
1,878,446	+	yeaS	b1798	0.47	+2.6
1,878,454	-	yeaS	b1798	0.48	-0.8
1,878,484	+	yeaS	b1798	0.53	+3.3
1,878,484	+	yeaS	b1798	0.53	+2.3
1,878,492	-	yeaS	b1798	0.54	-0.7
1,878,492	-	yeaS	b1798	0.54	+1.7
1,878,492	-	yeaS	b1798	0.54	+1.2
1,878,511	+	yeaS	b1798	0.57	+3.3
1,878,598	-	yeaS	b1798	0.71	+1.0
1,878,598	-	yeaS	b1798	0.71	-1.8
1,878,598	-	yeaS	b1798	0.71	-0.4
1,878,598	-	yeaS	b1798	0.71	+1.4
1,878,608	-	yeaS	b1798	0.72	+1.2
1,878,656	-	yeaS	b1798	0.80	+0.7
1,878,664	-	yeaS	b1798	0.81	-0.1
1,878,721	-				+0.7
1,878,738	+				+3.3
1,878,746	-				-0.0
1,878,752	-				+1.5
1,878,757	+				+3.3
1,878,757	+				+3.3
1,878,775	+				+3.3
1,878,841	+				+3.3
1,878,940	+				+3.3
1,879,004	-	yeaT	b1799	0.10	-0.2
1,879,009	+	yeaT	b1799	0.11	+3.3
1,879,027	-	yeaT	b1799	0.13	-0.7
1,879,118	-	yeaT	b1799	0.23	+1.0
1,879,175	-	yeaT	b1799	0.29	-0.6
1,879,175	-	yeaT	b1799	0.29	-2.4
1,879,210	-	yeaT	b1799	0.32	+0.2
1,879,210	-	yeaT	b1799	0.32	+0.7
1,879,231	-	yeaT	b1799	0.35	-0.3
1,879,245	+	yeaT	b1799	0.36	+3.3
1,879,253	-	yeaT	b1799	0.37	+2.3
1,879,266	+	yeaT	b1799	0.39	+0.9
1,879,340	-	yeaT	b1799	0.47	+1.0
1,879,340	-	yeaT	b1799	0.47	+0.5
1,879,410	+	yeaT	b1799	0.54	+2.3
1,879,426	+	yeaT	b1799	0.56	+2.3
1,879,601	-	yeaT	b1799	0.75	+0.3