Strain Fitness in Escherichia coli BW25113 around b3002

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,146,065	+	yghZ	b3001	0.14	+0.2
3,146,065	+	yghZ	b3001	0.14	-0.1
3,146,242	-	yghZ	b3001	0.31	-0.5
3,146,295	+	yghZ	b3001	0.36	+0.0
3,146,320	+	yghZ	b3001	0.39	+0.1
3,146,320	+	yghZ	b3001	0.39	+0.9
3,146,380	-	yghZ	b3001	0.44	+1.3
3,146,387	+	yghZ	b3001	0.45	-0.2
3,146,387	+	yghZ	b3001	0.45	-0.3
3,146,438	-	yghZ	b3001	0.50	-0.7
3,146,438	-	yghZ	b3001	0.50	+0.9
3,146,527	+	yghZ	b3001	0.58	-0.2
3,146,527	+	yghZ	b3001	0.58	-0.3
3,146,542	+	yghZ	b3001	0.60	-0.7
3,146,579	+	yghZ	b3001	0.63	-0.6
3,146,588	+	yghZ	b3001	0.64	+0.1
3,146,652	+	yghZ	b3001	0.70	+0.6
3,146,660	-	yghZ	b3001	0.71	+1.2
3,146,753	-	yghZ	b3001	0.80	+0.4
3,146,753	-	yghZ	b3001	0.80	+4.5
3,146,753	-	yghZ	b3001	0.80	-0.0
3,146,840	+	yghZ	b3001	0.88	+0.4
3,146,842	+	yghZ	b3001	0.89	-1.2
3,146,842	+	yghZ	b3001	0.89	+0.2
3,146,863	+				-0.8
3,146,863	+				-0.4
3,146,869	-				+0.7
3,146,971	-				-1.0
3,146,995	-				+0.5
3,147,027	+				-0.2
3,147,309	-	yqhA	b3002	0.63	+0.2
3,147,435	-	yqhA	b3002	0.88	-1.8
3,147,435	-	yqhA	b3002	0.88	-1.7
3,147,461	+				-1.0
3,147,526	+				+0.9
3,147,526	+				+1.0
3,147,531	-				+0.8
3,147,538	+				-0.3
3,147,538	+				-1.4
3,147,540	+				-0.5
3,147,540	+				-0.3
3,147,650	-				+0.3
3,147,713	+				-0.9
3,147,713	+				-0.2
3,147,713	+				-0.3
3,147,723	+				-0.1
3,147,783	-	yghA	b3003	0.11	-0.7
3,147,865	-	yghA	b3003	0.20	+0.7
3,147,865	-	yghA	b3003	0.20	-1.3
3,147,981	+	yghA	b3003	0.34	-0.1
3,147,993	-	yghA	b3003	0.35	-0.5
3,147,993	-	yghA	b3003	0.35	-0.6
3,148,064	-	yghA	b3003	0.43	-0.7
3,148,064	-	yghA	b3003	0.43	-0.3
3,148,078	-	yghA	b3003	0.45	+0.2
3,148,175	+	yghA	b3003	0.55	-1.1
3,148,175	+	yghA	b3003	0.55	-0.2
3,148,175	+	yghA	b3003	0.55	-0.3
3,148,175	+	yghA	b3003	0.55	-1.2
3,148,183	-	yghA	b3003	0.56	+0.6
3,148,183	-	yghA	b3003	0.56	+0.4
3,148,226	+	yghA	b3003	0.61	-0.3
3,148,250	-	yghA	b3003	0.64	-0.0
3,148,259	-	yghA	b3003	0.65	+0.1
3,148,282	-	yghA	b3003	0.68	+0.0
3,148,282	-	yghA	b3003	0.68	-0.9
3,148,299	+	yghA	b3003	0.69	+0.0
3,148,299	+	yghA	b3003	0.69	+0.4
3,148,371	+	yghA	b3003	0.78	-0.3
3,148,384	-	yghA	b3003	0.79	+0.1
3,148,384	-	yghA	b3003	0.79	-0.4
3,148,386	+	yghA	b3003	0.79	+0.2
3,148,386	+	yghA	b3003	0.79	-0.7
3,148,387	-	yghA	b3003	0.79	-0.0
3,148,387	-	yghA	b3003	0.79	-1.4